SMTL ID : 7brn.1

Crystal structure of Atg40 AIM fused to Atg8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x ALE: L-EPINEPHRINE(Non-covalent)

ALE.1: 4 residues within 4Å: Chain A: P.2, E.3, F.4, D.7 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.3, A:D.7, A:D.7

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: V.79, R.83, A.93, I.94 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.83, A:R.83, A:I.94 EDO.3: 6 residues within 4Å: Chain A: F.23, Y.27, K.31, R.32, E.35, K.66 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.31, A:K.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mochida, K. et al., Super-assembly of ER-phagy receptor Atg40 induces local ER remodeling at contacts with forming autophagosomal membranes. Nat Commun (2020)

Release Date

2020-07-08

Peptides

Autophagy-related protein 40,Autophagy-related protein 8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Autophagy-related protein 40,Autophagy-related protein 8