7brp.1 | SWISS-MODEL Template Library

SMTL ID : 7brp.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x U5G: boceprevir (bound form)(Covalent)

U5G.1:	16 residues within 4Å: Chain A: H.42, M.50, Y.55, L.142, N.143, G.144, S.145, C.146, H.165, M.166, E.167, D.188, R.189, Q.190, T.191, Q.193 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:M.50, A:M.166, A:E.167 Hydrogen bonds: A:N.143, A:G.144, A:S.145, A:C.146, A:H.165, A:E.167, A:E.167, A:E.167
U5G.2:	16 residues within 4Å: Chain B: H.42, M.50, Y.55, L.142, N.143, G.144, S.145, C.146, H.165, M.166, E.167, D.188, R.189, Q.190, T.191, Q.193 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:H.42, B:M.50, B:M.166, B:E.167, B:Q.193 Hydrogen bonds: B:N.143, B:G.144, B:S.145, B:C.146, B:H.165, B:E.167, B:E.167, B:E.167

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fu, L. et al., Both Boceprevir and GC376 efficaciously inhibit SARS-CoV-2 by targeting its main protease. Nat Commun (2020)

Release Date

2020-05-13

Peptides

3C-like proteinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A