SMTL ID : 7bvq.2 (1 other biounit)

Structure of human beta1 adrenergic receptor bound to carazolol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 9 residues within 4Å: Chain A: G.37, D.77, A.80, A.81, V.110, F.111, Q.112, G.114, E.115 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.37, A:D.77

1 x CAU: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol(Non-covalent)

CAU.2: 13 residues within 4Å: Chain A: W.251, T.252, D.255, V.256, V.259, T.260, F.335, S.345, S.349, W.400, N.407, N.426, Y.430 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.251, A:T.252, A:V.256, A:V.259, A:F.335, A:F.335 Hydrogen bonds: A:D.255, A:S.345, A:N.426, A:Y.430, A:Y.430 pi-Stacking: A:F.404, A:F.404

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain A: F.121, T.122, N.123, S.124, N.139 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.123, A:S.124, A:S.124 Water bridges: A:N.123 SO4.4: 5 residues within 4Å: Chain A: T.149, P.150, N.151, R.152, R.240 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.151, A:N.151, A:R.152 Salt bridges: A:R.240

1 x 1WV: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate(Non-covalent)

1WV.5: 5 residues within 4Å: Chain A: M.182, V.236, R.420, V.423, W.427 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.236 Hydrogen bonds: A:R.420

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.6: 5 residues within 4Å: Chain A: N.9, I.16, W.165, A.169, Q.172 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, X. et al., Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR. Cell Res. (2021)

Release Date

2020-12-02

Peptides

Endolysin,Beta-1 adrenergic receptor chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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Endolysin,Beta-1 adrenergic receptor chimera

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