SMTL ID : 7by4.1

Tetanus neurotoxin receptor binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.1: 7 residues within 4Å: Chain A: D.358, T.406, H.407, I.421, W.425, Y.426 Ligands: NA.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.358, A:D.358, A:T.406 Water bridges: A:T.406, A:N.408, A:N.408, A:S.423 Salt bridges: A:D.358

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: D.358, H.407 Ligands: BTB.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.407 Water bridges: A:N.408

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: F.159, N.160, A.161, K.166 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.161, A:K.166 Water bridges: A:N.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, C.M. et al., Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses. J Struct Biol X (2021)

Release Date

2021-02-17

Peptides

Tetanus toxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tetanus toxin