SMTL ID : 7c1a.1

Crystal structure of FumaraseC (S319C) from Mannheimia succiniciproducens in complex with malate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

homo-tetramer

Ligands

4 x LMR: (2S)-2-hydroxybutanedioic acid(Non-covalent)

LMR.1: 14 residues within 4Å: Chain A: S.101, T.103, S.142, S.143, N.144 Chain B: T.190, H.191 Chain D: G.320, C.321, S.322, I.323, M.324, K.327, N.329 13 PLIP interactions: 3 interactions with chain B, 4 interactions with chain D, 6 interactions with chain A Hydrogen bonds: B:T.190, B:H.191, D:S.322, D:I.323, D:N.329, A:S.101, A:T.103, A:T.103, A:S.143, A:N.144, A:N.144 Salt bridges: B:H.191, D:K.327 LMR.2: 13 residues within 4Å: Chain A: G.320, C.321, S.322, I.323, M.324, K.327, N.329 Chain C: T.190, H.191 Chain D: T.103, S.142, S.143, N.144 11 PLIP interactions: 4 interactions with chain D, 5 interactions with chain A, 2 interactions with chain C Hydrogen bonds: D:S.142, D:S.143, D:N.144, D:N.144, A:G.320, A:S.322, A:I.323, A:N.329, C:T.190 Salt bridges: A:K.327, C:H.191 LMR.3: 14 residues within 4Å: Chain A: T.190, H.191 Chain B: S.101, T.103, S.142, S.143, N.144 Chain C: G.320, C.321, S.322, I.323, M.324, K.327, N.329 12 PLIP interactions: 4 interactions with chain C, 5 interactions with chain B, 3 interactions with chain A Hydrogen bonds: C:S.322, C:I.323, C:N.329, B:S.101, B:S.142, B:S.143, B:N.144, B:N.144, A:T.190, A:H.191 Salt bridges: C:K.327, A:H.191 LMR.4: 14 residues within 4Å: Chain B: G.320, C.321, S.322, I.323, M.324, K.327, N.329 Chain C: S.101, T.103, S.142, S.143, N.144 Chain D: T.190, H.191 12 PLIP interactions: 5 interactions with chain B, 4 interactions with chain C, 3 interactions with chain D Hydrogen bonds: B:G.320, B:S.322, B:I.323, B:N.329, C:S.101, C:S.143, C:N.144, C:N.144, D:T.190, D:H.191 Salt bridges: B:K.327, D:H.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, B. et al., Structural and Biochemical analysis of FumaraseC from Mannheimia succiniciproducens. To Be Published

Release Date

2021-05-05

Peptides

Fumarate hydratase class II: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fumarate hydratase class II

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