SMTL ID : 7c33.3 (3 other biounits)

Macro domain of SARS-CoV-2 in complex with ADP-ribose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.83 Å

Oligo State

monomer

Ligands

1 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.1: 21 residues within 4Å: Chain A: D.24, I.25, A.40, N.42, K.46, H.47, G.48, G.49, G.50, V.51, A.52, P.127, L.128, S.130, A.131, G.132, I.133, F.134, A.156, F.158, L.162 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:D.24, A:I.25, A:N.42, A:G.48, A:G.50, A:V.51, A:A.52, A:S.130, A:S.130, A:G.132, A:I.133, A:F.134 pi-Stacking: A:F.158, A:F.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, M.H. et al., Structural, Biophysical, and Biochemical Elucidation of the SARS-CoV-2 Nonstructural Protein 3 Macro Domain. Acs Infect Dis. (2020)

Release Date

2020-11-11

Peptides

Non-structural protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Non-structural protein 3

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