SMTL ID : 7c4d.1

Marine microorganism esterase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: P.110, D.111, V.113, K.114 No protein-ligand interaction detected (PLIP) EDO.2: 3 residues within 4Å: Chain A: H.79, K.83, K.112 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.83

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 6 residues within 4Å: Chain A: G.31, L.32, S.96, M.97, H.136, H.253 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.32 Hydrogen bonds: A:L.32, A:S.96, A:M.97 Salt bridges: A:H.136, A:H.253

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 10 residues within 4Å: Chain A: H.30, G.31, G.34, S.35, N.38, W.39, H.95, F.173, W.254, H.256 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.31, A:S.35, A:N.38, A:W.254 Salt bridges: A:H.95, A:H.256

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, C. et al., Structural Insights into a Novel Esterase from the East Pacific Rise and Its Improved Thermostability by a Semirational Design. J.Agric.Food Chem. (2021)

Release Date

2021-05-26

Peptides

Putative esterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative esterase