SMTL ID : 7c61.1

Crystal structure of 5-HT1B-BRIL and SRP2070_Fab complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ERM: Ergotamine(Non-covalent)

ERM.1: 17 residues within 4Å: Chain C: W.94, D.98, I.99, C.102, T.103, C.168, V.169, V.170, T.172, W.336, F.339, F.340, L.357, F.360, D.361, T.364, Y.368 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:W.94, C:I.99, C:V.170, C:W.336, C:F.339, C:F.360, C:F.360 Hydrogen bonds: C:T.103, C:V.170, C:T.364, C:T.364 Salt bridges: C:D.98 pi-Stacking: C:F.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyagi, H. et al., The discovery of a new antibody for BRIL-fused GPCR structure determination. Sci Rep (2020)

Release Date

2020-07-29

Peptides

IGG LIGHT CHAIN: A
IGG HEAVY CHAIN: B
5-hydroxytryptamine receptor 1B,Soluble cytochrome b562,5-hydroxytryptamine receptor 1B: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
A

Membrane

We predict this structure to be a membrane protein.
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IGG LIGHT CHAIN

IGG HEAVY CHAIN

5-hydroxytryptamine receptor 1B,Soluble cytochrome b562,5-hydroxytryptamine receptor 1B

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