SMTL ID : 7c6o.1

Catalytic Subunit of Cobaltochelatase from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: G.266, D.267, D.268, D.269, F.727, G.728, R.800, N.834 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.267, A:D.267, A:D.268, A:D.269, A:R.800 Water bridges: A:R.800 GOL.2: 7 residues within 4Å: Chain A: C.690, D.694, R.737, E.744, D.748, V.753, R.1102 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.737, A:E.744, A:D.748, A:R.1102, A:R.1102 Water bridges: A:E.691, A:E.744, A:G.746 GOL.3: 7 residues within 4Å: Chain A: A.260, S.263, V.845, D.846, A.849, V.850, S.852 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.263, A:D.846 Water bridges: A:A.849 GOL.4: 3 residues within 4Å: Chain A: Y.521, H.522, Q.1024 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.1024

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 3 residues within 4Å: Chain A: D.125, S.127, V.129 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.127 Water bridges: A:D.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J.H. et al., Crystal structure of the large subunit of cobaltochelatase from Mycobacterium tuberculosis. Proteins (2021)

Release Date

2020-12-02

Peptides

Cobalamin biosynthesis protein CobN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cobalamin biosynthesis protein CobN