SMTL ID : 7c6q.1

Novel natural PPARalpha agonist with a unique binding mode

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SAU: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium(Non-covalent)

SAU.1: 11 residues within 4Å: Chain A: L.52, E.56, L.59, V.60, R.76, I.77, C.80, C.83, E.87, A.138, Y.139 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:E.56, A:L.59, A:V.60, A:Y.139 Hydrogen bonds: A:T.84 Water bridges: A:R.76, A:R.76, A:Y.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tian, S. et al., Structural Basis for PPARs Activation by The Dual PPAR alpha / gamma Agonist Sanguinarine: A Unique Mode of Ligand Recognition. Molecules (2021)

Release Date

2021-05-26

Peptides

Peroxisome proliferator-activated receptor alpha: A
LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor alpha

LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN