SMTL ID : 7c72.1 (1 other biounit)

Structure of a mycobacterium tuberculosis puromycin-hydrolyzing peptidase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: W.249, D.250, T.469, R.506, E.507, L.509, R.510, Y.587, G.590, L.591 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.250, A:R.506, A:R.506, A:R.510 GOL.3: 6 residues within 4Å: Chain A: V.270, K.271, G.272, E.276, W.295, P.311 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.271, A:K.271, A:G.272

1 x MLT: D-MALATE(Non-covalent)

MLT.2: 7 residues within 4Å: Chain A: L.218, V.219, A.220, W.239, R.255, T.264, P.267 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.239 Hydrogen bonds: A:L.218, A:A.220, A:A.220 Salt bridges: A:R.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y. et al., Mycobacterium tuberculosis puromycin hydrolase displays a prolyl oligopeptidase fold and an acyl aminopeptidase activity. Proteins (2021)

Release Date

2021-03-24

Peptides

Prolyl oligopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Prolyl oligopeptidase

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