SMTL ID : 7c82.1

Crystal structure of AlinE4, a SGNH-hydrolase family esterase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

monomer

Ligands

1 x ALA: ALANINE(Covalent)

ALA.1: 2 residues within 4Å: Chain A: P.188, A.189 No protein-ligand interaction detected (PLIP)

3 x CD: CADMIUM ION(Non-covalent)

CD.2: 1 residues within 4Å: Chain A: S.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.1 CD.3: 4 residues within 4Å: Chain A: H.164, H.166 Ligands: ACT.5, ACT.6 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Ligand interactions Metal complexes: A:H.164, A:H.166, ACT.5, ACT.6 CD.4: 1 residues within 4Å: Chain A: H.38 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.38

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 5 residues within 4Å: Chain A: H.164, V.165, H.166 Ligands: CD.3, ACT.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.165 Salt bridges: A:H.164, A:H.166 ACT.6: 4 residues within 4Å: Chain A: H.164, H.166 Ligands: CD.3, ACT.5 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.164, A:H.166 ACT.7: 2 residues within 4Å: Chain A: R.6, G.39 2 PLIP interactions: 2 interactions with chain A Water bridges: A:G.39 Salt bridges: A:R.6 ACT.8: 1 residues within 4Å: Chain A: N.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Z. et al., Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases. Biotechnol Biofuels (2020)

Release Date

2020-07-08

Peptides

SGNH-hydrolase family esterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SGNH-hydrolase family esterase

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