SMTL ID : 7ceg.1

Crystal structure of the complex between mouse PTP delta and neuroligin-3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.85 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: A.268, N.269, Q.286 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain A: N.224 Chain B: K.513 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.224, B:K.513 NAG.3: 2 residues within 4Å: Chain B: I.57, N.59 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.59 NAG.4: 4 residues within 4Å: Chain B: Q.452, S.453, L.454, N.486 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:L.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoshida, T. et al., Canonical versus non-canonical transsynaptic signaling of neuroligin 3 tunes development of sociality in mice. Nat Commun (2021)

Release Date

2021-02-24

Peptides

Isoform C of Receptor-type tyrosine-protein phosphatase delta: A
Neuroligin-3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Isoform C of Receptor-type tyrosine-protein phosphatase delta

Neuroligin-3