SMTL ID : 7cj2.1 (1 other biounit)

Crystal structure of the Fab antibody complexed with human YKL-40

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 9 residues within 4Å: Chain A: G.56, T.57 Chain C: N.39, I.40, S.41, N.42, T.47, W.48, R.84 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choi, S. et al., Crystal structure of the Fab antibody complexed with human YKL-40. To Be Published

Release Date

2021-07-14

Peptides

Fab(Heavy chain): A
Fab(Light chain): B
Chitinase 3-like 1 (Cartilage glycoprotein-39), isoform CRA_a: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
A

Fab(Heavy chain)

Fab(Light chain)

Chitinase 3-like 1 (Cartilage glycoprotein-39), isoform CRA_a

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