SMTL ID : 7ckk.1

Structural complex of FTO bound with Dac51

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.1: 12 residues within 4Å: Chain A: N.178, H.204, D.206, V.217, Y.268, H.280, V.282, R.289, S.291, T.293, R.295 Ligands: B6C.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.178, A:Y.268, A:Y.268, A:S.291 Salt bridges: A:R.69, A:R.289, A:R.295

1 x B6C: 2-{[2,6-dichloro-4-(3,5-dimethyl-1H-pyrazol-4-yl)phenyl]amino}-N-hydroxybenzamide(Non-covalent)

B6C.2: 17 residues within 4Å: Chain A: L.64, T.65, P.66, R.69, Y.79, Y.81, L.82, L.176, A.200, V.201, S.202, H.204, H.205, D.206, E.207, R.295 Ligands: OGA.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.65, A:Y.81, A:Y.81, A:L.82, A:L.176, A:E.207 Hydrogen bonds: A:S.202, A:S.202, A:E.207, A:R.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Tumors exploit FTO-mediated regulation of glycolytic metabolism to evade immune surveillance. Cell Metab. (2021)

Release Date

2021-07-21

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO