SMTL ID : 7cm0.1 (3 other biounits)

Crystal structure of a glutaminyl cyclase in complex with NHV-1009

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x G5R: 1-(cyclopentylmethyl)-1-[3-methoxy-4-(2-morpholin-4-ylethoxy)phenyl]-3-[3-(5-methylimidazol-1-yl)propyl]urea(Non-covalent)

G5R.1: 17 residues within 4Å: Chain A: D.125, E.167, E.168, D.214, Y.265, V.268, I.269, Q.270, D.271, I.287, S.289, F.291, P.292, E.293, W.295, H.296 Ligands: ZN.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.287, A:F.291, A:W.295 Hydrogen bonds: A:Q.270 pi-Stacking: A:W.295

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: D.125, E.168, W.295, H.296 Ligands: G5R.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.125, A:D.125, A:E.168, A:E.168, A:H.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Van Manh, N. et al., Discovery of highly potent human glutaminyl cyclase (QC) inhibitors as anti-Alzheimer's agents by the combination of pharmacophore-based and structure-based design. Eur.J.Med.Chem. (2021)

Release Date

2021-12-22

Peptides

Glutaminyl-peptide cyclotransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutaminyl-peptide cyclotransferase

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