SMTL ID : 7cq3.1

Crystal structure of Slx1-Slx4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.218, C.221, H.251, C.254 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.218, A:C.221, A:H.251, A:C.254 ZN.2: 4 residues within 4Å: Chain A: C.241, C.246, C.279, C.282 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.241, A:C.246, A:C.279, A:C.282

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: A.52, Y.53, R.54 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:A.52, A:Y.53, A:R.54 Water bridges: A:R.54, A:R.54 Salt bridges: A:R.54 SO4.4: 2 residues within 4Å: Chain A: T.213, G.214 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.214 SO4.5: 4 residues within 4Å: Chain B: F.33, P.34, D.35, F.36 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:D.35, B:D.35, B:F.36 Water bridges: B:K.54, B:K.54, B:K.54, B:K.54 Salt bridges: B:K.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, X. et al., Structure specific DNA recognition by the SLX1-SLX4 endonuclease complex. Nucleic Acids Res. (2021)

Release Date

2021-06-16

Peptides

Structure-specific endonuclease subunit SLX1: A
SLX4 isoform 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Structure-specific endonuclease subunit SLX1

SLX4 isoform 1

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