SMTL ID : 7cqf.1

Crystal structure of PSD-95 PDZ3 fused with ADAM22 C-terminal peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: R.22 Ligand excluded by PLIP

1 x CHT: CHOLINE ION(Non-covalent)

CHT.2: 3 residues within 4Å: Chain A: W.146, E.147, T.148 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:W.146

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.4: 7 residues within 4Å: Chain A: G.42, E.43, F.46, E.105, R.108, F.109 Ligands: EDO.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.42, A:E.105, A:R.108 EDO.5: 3 residues within 4Å: Chain A: G.38, H.81, W.146 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.38 Water bridges: A:G.38, A:E.40 EDO.6: 7 residues within 4Å: Chain A: G.42, E.43, Q.67, R.77, K.102, E.105 Ligands: EDO.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.67, A:R.77, A:K.102, A:E.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukata, Y. et al., LGI1-ADAM22-MAGUK configures transsynaptic nanoalignment for synaptic transmission and epilepsy prevention. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-01-06

Peptides

Disks large homolog 4,Disintegrin and metalloproteinase domain-containing protein 22: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Disks large homolog 4,Disintegrin and metalloproteinase domain-containing protein 22