SMTL ID : 7cqu.1

GmaS/ADP/MetSox-P complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

homo-12-mer

Ligands

36 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain A: E.142, E.206, N.208 Ligands: MG.2, MG.3, ADP.4, P3S.5 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.142, A:E.206, H2O.11 MG.2: 9 residues within 4Å: Chain A: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.1, ADP.4, P3S.5 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.142, A:E.142, A:H.255, A:E.345 MG.3: 5 residues within 4Å: Chain A: E.144, E.199, E.206 Ligands: MG.1, P3S.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.144, A:E.199, A:E.206, H2O.7 MG.6: 7 residues within 4Å: Chain B: E.142, E.206, N.208 Ligands: MG.7, MG.8, ADP.9, P3S.10 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.142, B:E.206, H2O.26 MG.7: 9 residues within 4Å: Chain B: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.6, ADP.9, P3S.10 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.142, B:E.142, B:H.255, B:E.345 MG.8: 5 residues within 4Å: Chain B: E.144, E.199, E.206 Ligands: MG.6, P3S.10 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.144, B:E.199, B:E.206, H2O.26 MG.11: 6 residues within 4Å: Chain C: E.142, E.206 Ligands: MG.12, MG.13, ADP.14, P3S.15 3 PLIP interactions: 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.142, C:E.206, H2O.42 MG.12: 9 residues within 4Å: Chain C: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.11, ADP.14, P3S.15 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:E.142, C:E.142, C:H.255, C:E.345 MG.13: 5 residues within 4Å: Chain C: E.144, E.199, E.206 Ligands: MG.11, P3S.15 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.144, C:E.199, C:E.206, H2O.42 MG.16: 7 residues within 4Å: Chain D: E.142, E.206, N.208 Ligands: MG.17, MG.18, ADP.19, P3S.20 3 PLIP interactions: 2 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.142, D:E.206, H2O.61 MG.17: 9 residues within 4Å: Chain D: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.16, ADP.19, P3S.20 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:E.142, D:E.142, D:H.255, D:E.345 MG.18: 5 residues within 4Å: Chain D: E.144, E.199, E.206 Ligands: MG.16, P3S.20 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.144, D:E.199, D:E.206, H2O.57 MG.21: 7 residues within 4Å: Chain E: E.142, E.206, N.208 Ligands: MG.22, MG.23, ADP.24, P3S.25 3 PLIP interactions: 2 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.142, E:E.206, H2O.77 MG.22: 9 residues within 4Å: Chain E: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.21, ADP.24, P3S.25 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:E.142, E:E.142, E:H.255, E:E.345 MG.23: 5 residues within 4Å: Chain E: E.144, E.199, E.206 Ligands: MG.21, P3S.25 4 PLIP interactions: 3 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.144, E:E.199, E:E.206, H2O.76 MG.26: 6 residues within 4Å: Chain F: E.142, E.206 Ligands: MG.27, MG.28, ADP.29, P3S.30 3 PLIP interactions: 2 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:E.142, F:E.206, H2O.92 MG.27: 9 residues within 4Å: Chain F: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.26, ADP.29, P3S.30 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:E.142, F:E.142, F:H.255, F:E.345 MG.28: 5 residues within 4Å: Chain F: E.144, E.199, E.206 Ligands: MG.26, P3S.30 4 PLIP interactions: 3 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:E.144, F:E.199, F:E.206, H2O.92 MG.31: 7 residues within 4Å: Chain G: E.142, E.206, N.208 Ligands: MG.32, MG.33, ADP.34, P3S.35 3 PLIP interactions: 2 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:E.142, G:E.206, H2O.112 MG.32: 9 residues within 4Å: Chain G: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.31, ADP.34, P3S.35 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:E.142, G:E.142, G:H.255, G:E.345 MG.33: 5 residues within 4Å: Chain G: E.144, E.199, E.206 Ligands: MG.31, P3S.35 4 PLIP interactions: 3 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:E.144, G:E.199, G:E.206, H2O.108 MG.36: 7 residues within 4Å: Chain H: E.142, E.206, N.208 Ligands: MG.37, MG.38, ADP.39, P3S.40 3 PLIP interactions: 2 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:E.142, H:E.206, H2O.127 MG.37: 9 residues within 4Å: Chain H: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.36, ADP.39, P3S.40 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:E.142, H:E.142, H:H.255, H:E.345 MG.38: 5 residues within 4Å: Chain H: E.144, E.199, E.206 Ligands: MG.36, P3S.40 4 PLIP interactions: 3 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:E.144, H:E.199, H:E.206, H2O.127 MG.41: 6 residues within 4Å: Chain I: E.142, E.206 Ligands: MG.42, MG.43, ADP.44, P3S.45 3 PLIP interactions: 2 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:E.142, I:E.206, H2O.142 MG.42: 9 residues within 4Å: Chain I: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.41, ADP.44, P3S.45 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:E.142, I:E.142, I:H.255, I:E.345 MG.43: 5 residues within 4Å: Chain I: E.144, E.199, E.206 Ligands: MG.41, P3S.45 4 PLIP interactions: 3 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:E.144, I:E.199, I:E.206, H2O.142 MG.46: 7 residues within 4Å: Chain J: E.142, E.206, N.208 Ligands: MG.47, MG.48, ADP.49, P3S.50 3 PLIP interactions: 2 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.142, J:E.206, H2O.162 MG.47: 9 residues within 4Å: Chain J: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.46, ADP.49, P3S.50 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:E.142, J:E.142, J:H.255, J:E.345 MG.48: 5 residues within 4Å: Chain J: E.144, E.199, E.206 Ligands: MG.46, P3S.50 4 PLIP interactions: 3 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.144, J:E.199, J:E.206, H2O.158 MG.51: 7 residues within 4Å: Chain K: E.142, E.206, N.208 Ligands: MG.52, MG.53, ADP.54, P3S.55 3 PLIP interactions: 2 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:E.142, K:E.206, H2O.178 MG.52: 9 residues within 4Å: Chain K: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.51, ADP.54, P3S.55 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:E.142, K:E.142, K:H.255, K:E.345 MG.53: 5 residues within 4Å: Chain K: E.144, E.199, E.206 Ligands: MG.51, P3S.55 4 PLIP interactions: 3 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:E.144, K:E.199, K:E.206, H2O.177 MG.56: 6 residues within 4Å: Chain L: E.142, E.206 Ligands: MG.57, MG.58, ADP.59, P3S.60 3 PLIP interactions: 2 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:E.142, L:E.206, H2O.193 MG.57: 9 residues within 4Å: Chain L: E.142, H.255, H.257, R.337, E.345, R.347 Ligands: MG.56, ADP.59, P3S.60 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:E.142, L:E.142, L:H.255, L:E.345 MG.58: 5 residues within 4Å: Chain L: E.144, E.199, E.206 Ligands: MG.56, P3S.60 4 PLIP interactions: 3 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:E.144, L:E.199, L:E.206, H2O.193

12 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.4: 22 residues within 4Å: Chain A: K.138, H.139, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.1, MG.2, P3S.5 32 PLIP interactions: 2 interactions with chain I, 30 interactions with chain A Hydrogen bonds: I:D.82, A:G.140, A:Y.194, A:Q.195, A:W.209, A:Y.211, A:S.259, A:S.259, A:N.267, A:R.343 Water bridges: I:K.50, A:V.141, A:V.141, A:Q.195, A:N.208, A:D.210, A:R.332, A:R.332, A:R.332, A:R.332, A:R.332, A:R.337, A:R.343, A:R.343, A:R.343 Salt bridges: A:H.257, A:H.257, A:R.332, A:R.337 pi-Stacking: A:Y.211, A:Y.211 pi-Cation interactions: A:R.343 ADP.9: 21 residues within 4Å: Chain B: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.6, MG.7, P3S.10 30 PLIP interactions: 28 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.140, B:Y.194, B:Q.195, B:W.209, B:Y.211, B:S.259, B:S.259, B:N.267, B:R.343, A:D.82 Water bridges: B:V.141, B:V.141, B:N.208, B:R.332, B:R.332, B:R.332, B:R.332, B:R.332, B:R.337, B:R.343, B:R.343, B:R.343, A:K.50 Salt bridges: B:H.257, B:H.257, B:R.332, B:R.337 pi-Stacking: B:Y.211, B:Y.211 pi-Cation interactions: B:R.343 ADP.14: 21 residues within 4Å: Chain C: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.11, MG.12, P3S.15 33 PLIP interactions: 31 interactions with chain C, 2 interactions with chain E Hydrogen bonds: C:G.140, C:Y.194, C:Q.195, C:W.209, C:Y.211, C:S.259, C:S.259, C:N.267, C:R.343 Water bridges: C:V.141, C:V.141, C:E.206, C:N.208, C:Y.211, C:Y.211, C:R.332, C:R.332, C:R.332, C:R.332, C:R.332, C:R.337, C:R.343, C:R.343, C:R.343, E:K.50, E:K.50 Salt bridges: C:H.257, C:H.257, C:R.332, C:R.337 pi-Stacking: C:Y.211, C:Y.211 pi-Cation interactions: C:R.343 ADP.19: 22 residues within 4Å: Chain D: K.138, H.139, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.16, MG.17, P3S.20 32 PLIP interactions: 30 interactions with chain D, 2 interactions with chain L Hydrogen bonds: D:G.140, D:Y.194, D:Q.195, D:W.209, D:Y.211, D:S.259, D:S.259, D:N.267, D:R.343, L:D.82 Water bridges: D:V.141, D:V.141, D:Q.195, D:N.208, D:D.210, D:R.332, D:R.332, D:R.332, D:R.332, D:R.332, D:R.337, D:R.343, D:R.343, D:R.343, L:K.50 Salt bridges: D:H.257, D:H.257, D:R.332, D:R.337 pi-Stacking: D:Y.211, D:Y.211 pi-Cation interactions: D:R.343 ADP.24: 21 residues within 4Å: Chain E: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.21, MG.22, P3S.25 30 PLIP interactions: 28 interactions with chain E, 2 interactions with chain D Hydrogen bonds: E:G.140, E:Y.194, E:Q.195, E:W.209, E:Y.211, E:S.259, E:S.259, E:N.267, E:R.343, D:D.82 Water bridges: E:V.141, E:V.141, E:N.208, E:R.332, E:R.332, E:R.332, E:R.332, E:R.332, E:R.337, E:R.343, E:R.343, E:R.343, D:K.50 Salt bridges: E:H.257, E:H.257, E:R.332, E:R.337 pi-Stacking: E:Y.211, E:Y.211 pi-Cation interactions: E:R.343 ADP.29: 21 residues within 4Å: Chain F: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.26, MG.27, P3S.30 33 PLIP interactions: 30 interactions with chain F, 3 interactions with chain B Hydrogen bonds: F:G.140, F:Y.194, F:Q.195, F:W.209, F:Y.211, F:S.259, F:S.259, F:N.267, F:R.343 Water bridges: F:V.141, F:V.141, F:N.208, F:Y.211, F:Y.211, F:R.332, F:R.332, F:R.332, F:R.332, F:R.332, F:R.337, F:R.343, F:R.343, F:R.343, B:K.50, B:K.50, B:K.50 Salt bridges: F:H.257, F:H.257, F:R.332, F:R.337 pi-Stacking: F:Y.211, F:Y.211 pi-Cation interactions: F:R.343 ADP.34: 22 residues within 4Å: Chain G: K.138, H.139, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.31, MG.32, P3S.35 31 PLIP interactions: 28 interactions with chain G, 3 interactions with chain C Hydrogen bonds: G:G.140, G:Y.194, G:Q.195, G:W.209, G:Y.211, G:S.259, G:S.259, G:N.267, G:R.343, C:D.82 Water bridges: G:V.141, G:V.141, G:N.208, G:R.332, G:R.332, G:R.332, G:R.332, G:R.332, G:R.337, G:R.343, G:R.343, G:R.343, C:K.50, C:K.50 Salt bridges: G:H.257, G:H.257, G:R.332, G:R.337 pi-Stacking: G:Y.211, G:Y.211 pi-Cation interactions: G:R.343 ADP.39: 21 residues within 4Å: Chain H: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.36, MG.37, P3S.40 31 PLIP interactions: 29 interactions with chain H, 2 interactions with chain G Hydrogen bonds: H:G.140, H:Y.194, H:Q.195, H:W.209, H:Y.211, H:S.259, H:S.259, H:N.267, H:R.343, G:D.82 Water bridges: H:V.141, H:V.141, H:N.208, H:D.210, H:R.332, H:R.332, H:R.332, H:R.332, H:R.332, H:R.337, H:R.343, H:R.343, H:R.343, G:K.50 Salt bridges: H:H.257, H:H.257, H:R.332, H:R.337 pi-Stacking: H:Y.211, H:Y.211 pi-Cation interactions: H:R.343 ADP.44: 21 residues within 4Å: Chain I: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.41, MG.42, P3S.45 32 PLIP interactions: 30 interactions with chain I, 2 interactions with chain K Hydrogen bonds: I:G.140, I:Y.194, I:Q.195, I:W.209, I:Y.211, I:S.259, I:S.259, I:N.267, I:R.343 Water bridges: I:V.141, I:V.141, I:E.206, I:N.208, I:D.210, I:R.332, I:R.332, I:R.332, I:R.332, I:R.332, I:R.337, I:R.343, I:R.343, I:R.343, K:K.50, K:K.50 Salt bridges: I:H.257, I:H.257, I:R.332, I:R.337 pi-Stacking: I:Y.211, I:Y.211 pi-Cation interactions: I:R.343 ADP.49: 22 residues within 4Å: Chain J: K.138, H.139, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.46, MG.47, P3S.50 31 PLIP interactions: 28 interactions with chain J, 3 interactions with chain F Hydrogen bonds: J:G.140, J:Y.194, J:Q.195, J:W.209, J:Y.211, J:S.259, J:S.259, J:N.267, J:R.343, F:D.82 Water bridges: J:V.141, J:V.141, J:N.208, J:R.332, J:R.332, J:R.332, J:R.332, J:R.332, J:R.337, J:R.343, J:R.343, J:R.343, F:K.50, F:K.50 Salt bridges: J:H.257, J:H.257, J:R.332, J:R.337 pi-Stacking: J:Y.211, J:Y.211 pi-Cation interactions: J:R.343 ADP.54: 21 residues within 4Å: Chain K: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.51, MG.52, P3S.55 31 PLIP interactions: 29 interactions with chain K, 2 interactions with chain J Hydrogen bonds: K:G.140, K:Y.194, K:Q.195, K:W.209, K:Y.211, K:S.259, K:S.259, K:N.267, K:R.343, J:D.82 Water bridges: K:V.141, K:V.141, K:N.208, K:D.210, K:R.332, K:R.332, K:R.332, K:R.332, K:R.332, K:R.337, K:R.343, K:R.343, K:R.343, J:K.50 Salt bridges: K:H.257, K:H.257, K:R.332, K:R.337 pi-Stacking: K:Y.211, K:Y.211 pi-Cation interactions: K:R.343 ADP.59: 21 residues within 4Å: Chain L: K.138, G.140, E.142, Y.194, Q.195, E.206, N.208, W.209, D.210, Y.211, H.257, L.258, S.259, N.267, R.332, R.337, R.343, E.345 Ligands: MG.56, MG.57, P3S.60 32 PLIP interactions: 29 interactions with chain L, 3 interactions with chain H Hydrogen bonds: L:G.140, L:Y.194, L:Q.195, L:W.209, L:Y.211, L:S.259, L:S.259, L:N.267, L:R.343 Water bridges: L:V.141, L:V.141, L:N.208, L:D.210, L:R.332, L:R.332, L:R.332, L:R.332, L:R.332, L:R.337, L:R.343, L:R.343, L:R.343, H:K.50, H:K.50, H:K.50 Salt bridges: L:H.257, L:H.257, L:R.332, L:R.337 pi-Stacking: L:Y.211, L:Y.211 pi-Cation interactions: L:R.343

12 x P3S: L-METHIONINE-S-SULFOXIMINE PHOSPHATE(Non-covalent)

P3S.5: 19 residues within 4Å: Chain A: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.1, MG.2, MG.3, ADP.4 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.320 Hydrogen bonds: A:E.144, A:Q.204, A:G.251, A:G.253, A:H.255, A:R.332, A:R.347, A:R.347 Water bridges: A:G.251 Salt bridges: A:H.255, A:R.308 P3S.10: 19 residues within 4Å: Chain B: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.6, MG.7, MG.8, ADP.9 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:W.320 Hydrogen bonds: B:E.144, B:Q.204, B:G.251, B:G.253, B:H.255, B:R.332, B:R.347, B:R.347 Salt bridges: B:H.255, B:R.308 P3S.15: 19 residues within 4Å: Chain C: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.11, MG.12, MG.13, ADP.14 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:W.320 Hydrogen bonds: C:E.144, C:G.251, C:G.253, C:R.332, C:R.347, C:R.347 Water bridges: C:Q.204, C:G.251 Salt bridges: C:H.255, C:R.308 P3S.20: 19 residues within 4Å: Chain D: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.16, MG.17, MG.18, ADP.19 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:W.320 Hydrogen bonds: D:E.144, D:Q.204, D:G.251, D:G.253, D:H.255, D:R.332, D:R.347, D:R.347 Water bridges: D:G.251 Salt bridges: D:H.255, D:R.308 P3S.25: 19 residues within 4Å: Chain E: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.21, MG.22, MG.23, ADP.24 11 PLIP interactions: 11 interactions with chain E Hydrophobic interactions: E:W.320 Hydrogen bonds: E:E.144, E:Q.204, E:G.251, E:G.253, E:H.255, E:R.332, E:R.347, E:R.347 Salt bridges: E:H.255, E:R.308 P3S.30: 19 residues within 4Å: Chain F: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.26, MG.27, MG.28, ADP.29 11 PLIP interactions: 11 interactions with chain F Hydrophobic interactions: F:W.320 Hydrogen bonds: F:E.144, F:G.251, F:G.253, F:R.332, F:R.347, F:R.347 Water bridges: F:Q.204, F:G.251 Salt bridges: F:H.255, F:R.308 P3S.35: 19 residues within 4Å: Chain G: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.31, MG.32, MG.33, ADP.34 12 PLIP interactions: 12 interactions with chain G Hydrophobic interactions: G:W.320 Hydrogen bonds: G:E.144, G:Q.204, G:G.251, G:G.253, G:R.332, G:R.347, G:R.347 Water bridges: G:E.199, G:G.251 Salt bridges: G:H.255, G:R.308 P3S.40: 19 residues within 4Å: Chain H: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.36, MG.37, MG.38, ADP.39 10 PLIP interactions: 10 interactions with chain H Hydrophobic interactions: H:W.320 Hydrogen bonds: H:E.144, H:Q.204, H:G.251, H:G.253, H:R.332, H:R.347, H:R.347 Salt bridges: H:H.255, H:R.308 P3S.45: 19 residues within 4Å: Chain I: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.41, MG.42, MG.43, ADP.44 13 PLIP interactions: 13 interactions with chain I Hydrophobic interactions: I:W.320 Hydrogen bonds: I:E.144, I:E.199, I:G.251, I:G.253, I:H.255, I:R.332, I:R.347, I:R.347 Water bridges: I:Q.204, I:G.251 Salt bridges: I:H.255, I:R.308 P3S.50: 19 residues within 4Å: Chain J: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.46, MG.47, MG.48, ADP.49 12 PLIP interactions: 12 interactions with chain J Hydrophobic interactions: J:W.320 Hydrogen bonds: J:E.144, J:Q.204, J:G.251, J:G.253, J:R.332, J:R.347, J:R.347 Water bridges: J:E.199, J:G.251 Salt bridges: J:H.255, J:R.308 P3S.55: 19 residues within 4Å: Chain K: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.51, MG.52, MG.53, ADP.54 10 PLIP interactions: 10 interactions with chain K Hydrophobic interactions: K:W.320 Hydrogen bonds: K:E.144, K:Q.204, K:G.251, K:G.253, K:R.332, K:R.347, K:R.347 Salt bridges: K:H.255, K:R.308 P3S.60: 19 residues within 4Å: Chain L: E.142, E.144, E.199, E.206, T.250, G.251, G.253, H.255, R.308, T.319, W.320, S.321, R.332, E.345, R.347 Ligands: MG.56, MG.57, MG.58, ADP.59 13 PLIP interactions: 13 interactions with chain L Hydrophobic interactions: L:W.320 Hydrogen bonds: L:E.144, L:E.199, L:G.251, L:G.253, L:H.255, L:R.332, L:R.347, L:R.347 Water bridges: L:Q.204, L:G.251 Salt bridges: L:H.255, L:R.308

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, N. et al., Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine. J.Biol.Chem. (2020)

Release Date

2020-11-18

Peptides

Type III glutamate--ammonia ligase: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

G
A

H
B

I
C

J
A

K
B

L
C

Type III glutamate--ammonia ligase

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