SMTL ID : 7ctq.1 (1 other biounit)

Peptidyl tryptophan dihydroxylase QhpG essential for tryptophylquinone cofactor biogenesis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 30 residues within 4Å: Chain A: G.12, A.13, G.14, P.15, A.16, S.35, E.36, E.44, G.45, R.91, G.112, R.113, V.114, A.141, R.142, G.143, R.144, Q.145, S.160, Q.197, R.242, G.261, D.262, P.269, G.272, N.273, G.274, I.275, S.278 Ligands: HEZ.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:P.269, A:P.269 Hydrogen bonds: A:A.13, A:G.14, A:A.16, A:G.17, A:S.35, A:E.36, A:E.44, A:E.44, A:G.45, A:G.45, A:R.91, A:R.91, A:V.114, A:V.114, A:R.142, A:D.262, A:G.274, A:I.275, A:S.278 Water bridges: A:G.143, A:D.262, A:D.262, A:D.262, A:A.263 Salt bridges: A:R.91

3 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.2: 10 residues within 4Å: Chain A: R.72, E.86, V.176, W.183, W.185, Q.197, P.269, L.270, G.272 Ligands: FAD.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.176, A:W.183, A:W.185 Hydrogen bonds: A:R.72, A:Q.197 HEZ.3: 1 residues within 4Å: Chain A: R.359 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.359 HEZ.4: 4 residues within 4Å: Chain A: P.206, L.211, A.241, S.243 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.211, A:A.241 Hydrogen bonds: A:S.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oozeki, T. et al., Functional and structural characterization of a flavoprotein monooxygenase essential for biogenesis of tryptophylquinone cofactor. Nat Commun (2021)

Release Date

2021-02-17

Peptides

Peptidyl tryptophan dihydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl tryptophan dihydroxylase

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