SMTL ID : 7cu8.1

Crystal structure of the soluble domain of TiME protein from Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-heptamer

Ligands

11 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.14, K.15, G.16, S.17 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.14, A:G.16, A:S.17 SO4.2: 4 residues within 4Å: Chain A: K.15, G.27, W.28, E.29 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.29, A:E.29 Salt bridges: A:K.15 SO4.3: 4 residues within 4Å: Chain B: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.14, B:G.16, B:S.17, B:S.17 SO4.4: 4 residues within 4Å: Chain C: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:G.14, C:G.14, C:G.16, C:S.17 SO4.5: 4 residues within 4Å: Chain C: K.15, G.27, W.28, E.29 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.29, C:E.29 Salt bridges: C:K.15 SO4.6: 4 residues within 4Å: Chain D: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:G.14, D:G.14, D:G.16, D:S.17 SO4.7: 4 residues within 4Å: Chain E: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:G.14, E:G.16, E:S.17, E:S.17 SO4.8: 4 residues within 4Å: Chain E: K.15, G.27, W.28, E.29 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:W.28, E:E.29 Salt bridges: E:K.15 SO4.9: 4 residues within 4Å: Chain F: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:G.14, F:G.14, F:G.16, F:S.17 SO4.10: 4 residues within 4Å: Chain G: G.14, K.15, G.16, S.17 4 PLIP interactions: 4 interactions with chain G Hydrogen bonds: G:G.14, G:G.14, G:G.16, G:S.17 SO4.11: 4 residues within 4Å: Chain G: K.15, G.27, W.28, E.29 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:G.27, G:E.29 Salt bridges: G:K.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cai, X. et al., Identification and architecture of a putative secretion tube across mycobacterial outer envelope. Sci Adv (2021)

Release Date

2021-08-25

Peptides

Tube-forming protein in Mycobacterial Envelope (TiME): ABCDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

Tube-forming protein in Mycobacterial Envelope (TiME)