SMTL ID : 7cux.1

Crystal structure of human Schlafen 5 N'-terminal domain (SLFN5-N) involved in ssRNA cleaving and DNA binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.29 Å

Oligo State

homo-hexamer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.255, F.256, C.257, Q.259, C.291, C.292 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.255, A:C.291, A:C.292 ZN.2: 5 residues within 4Å: Chain B: H.255, C.257, P.261, C.291, C.292 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.255, B:C.257, B:C.291, B:C.292 ZN.3: 4 residues within 4Å: Chain C: H.255, C.257, C.291, C.292 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.255, C:C.291, C:C.292 ZN.4: 5 residues within 4Å: Chain D: H.255, C.257, P.261, C.291, C.292 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:H.255, D:C.257, D:C.292 ZN.5: 5 residues within 4Å: Chain E: H.255, C.257, P.261, C.291, C.292 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:C.257, E:C.292 ZN.6: 5 residues within 4Å: Chain F: H.255, C.257, P.261, C.291, C.292 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:H.255, F:C.291, F:C.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, J.Y. et al., Crystal structure of human Schlafen 5 N'-terminal domain (SLFN5-N) involved in ssRNA cleaving and DNA binding. To Be Published

Release Date

2021-08-25

Peptides

Schlafen family member 5: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Schlafen family member 5