- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-3-mer
- Ligands
- 20 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 31 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
NAG.21: 2 residues within 4Å:- Chain A: Y.28, N.61
Ligand excluded by PLIPNAG.22: 3 residues within 4Å:- Chain A: N.122, T.124, V.127
Ligand excluded by PLIPNAG.23: 2 residues within 4Å:- Chain A: E.132, N.165
Ligand excluded by PLIPNAG.24: 2 residues within 4Å:- Chain A: G.232, N.234
Ligand excluded by PLIPNAG.25: 3 residues within 4Å:- Chain A: N.280, E.281, N.282
Ligand excluded by PLIPNAG.26: 4 residues within 4Å:- Chain A: N.331, P.579, Q.580
- Ligands: NAG.27
Ligand excluded by PLIPNAG.27: 1 residues within 4Å:- Ligands: NAG.26
Ligand excluded by PLIPNAG.28: 2 residues within 4Å:- Chain A: N.603, T.604
Ligand excluded by PLIPNAG.29: 1 residues within 4Å:- Chain A: N.616
Ligand excluded by PLIPNAG.30: 1 residues within 4Å:- Chain A: N.657
Ligand excluded by PLIPNAG.31: 4 residues within 4Å:- Chain A: N.709, I.1130, G.1131
- Chain B: D.796
Ligand excluded by PLIPNAG.32: 1 residues within 4Å:- Chain B: N.61
Ligand excluded by PLIPNAG.33: 3 residues within 4Å:- Chain B: N.122, V.127, K.129
Ligand excluded by PLIPNAG.34: 1 residues within 4Å:- Chain B: N.165
Ligand excluded by PLIPNAG.35: 2 residues within 4Å:- Chain A: H.519
- Chain B: N.234
Ligand excluded by PLIPNAG.36: 2 residues within 4Å:- Chain B: E.281, N.282
Ligand excluded by PLIPNAG.37: 1 residues within 4Å:- Chain B: N.603
Ligand excluded by PLIPNAG.38: 1 residues within 4Å:- Chain B: N.616
Ligand excluded by PLIPNAG.39: 1 residues within 4Å:- Chain B: N.657
Ligand excluded by PLIPNAG.40: 5 residues within 4Å:- Chain B: A.706, E.1072, K.1073, N.1074
- Ligands: NAG.41
Ligand excluded by PLIPNAG.41: 1 residues within 4Å:- Ligands: NAG.40
Ligand excluded by PLIPNAG.42: 2 residues within 4Å:- Chain C: Y.28, N.61
Ligand excluded by PLIPNAG.43: 1 residues within 4Å:- Chain C: N.122
Ligand excluded by PLIPNAG.44: 2 residues within 4Å:- Chain B: Y.396
- Chain C: N.165
Ligand excluded by PLIPNAG.45: 1 residues within 4Å:- Chain C: N.234
Ligand excluded by PLIPNAG.46: 3 residues within 4Å:- Chain C: N.280, E.281, N.282
Ligand excluded by PLIPNAG.47: 3 residues within 4Å:- Chain C: N.331, Q.580
- Ligands: NAG.48
Ligand excluded by PLIPNAG.48: 1 residues within 4Å:- Ligands: NAG.47
Ligand excluded by PLIPNAG.49: 1 residues within 4Å:- Chain C: N.603
Ligand excluded by PLIPNAG.50: 1 residues within 4Å:- Chain C: N.616
Ligand excluded by PLIPNAG.51: 1 residues within 4Å:- Chain C: N.657
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yan, R. et al., Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies. Cell Res. (2021)
- Release Date
- 2021-03-10
- Peptides
- Spike glycoprotein: ABC
Immunoglobulin heavy variable 3-30-3,chain H of P5A-1B6_3B,Immunoglobulin gamma-1 heavy chain: DFH
Immunoglobulin kappa variable 1-33,Uncharacterized protein: EGI - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
HF
IH
JE
KG
MI
N
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-3-mer
- Ligands
- 20 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 31 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yan, R. et al., Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies. Cell Res. (2021)
- Release Date
- 2021-03-10
- Peptides
- Spike glycoprotein: ABC
Immunoglobulin heavy variable 3-30-3,chain H of P5A-1B6_3B,Immunoglobulin gamma-1 heavy chain: DFH
Immunoglobulin kappa variable 1-33,Uncharacterized protein: EGI - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
HF
IH
JE
KG
MI
N