SMTL ID : 7d0e.1

Crystal structure of FIP200 Claw/p-CCPG1 FIR2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GO9: 3-(2-hydroxyethyloxy)-2-[2-(2-hydroxyethyloxy)ethoxymethyl]-2-(2-hydroxyethyloxymethyl)propan-1-ol(Non-covalent)

GO9.1: 10 residues within 4Å: Chain A: I.21, F.32, T.33, V.34, S.35 Chain C: I.21, L.22, P.64, W.65 Ligands: GO9.3 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain A Hydrogen bonds: C:L.22, A:T.33 Water bridges: A:T.33 GO9.3: 10 residues within 4Å: Chain A: I.21, L.22, P.64, W.65 Chain C: I.21, F.32, T.33, V.34, S.35 Ligands: GO9.1 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:L.22, C:T.33 Water bridges: C:T.33

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 6 residues within 4Å: Chain A: H.3, S.4, L.17, K.69, W.101 Ligands: PEG.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.69, A:W.101 PEG.4: 6 residues within 4Å: Chain C: H.3, S.4, L.17, K.69, W.101 Ligands: PEG.2 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.69, C:W.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, Z. et al., Phosphorylation regulates the binding of autophagy receptors to FIP200 Claw domain for selective autophagy initiation. Nat Commun (2021)

Release Date

2021-03-31

Peptides

RB1-inducible coiled-coil protein 1: AC
Cell cycle progression protein 1 FIR2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

RB1-inducible coiled-coil protein 1

Cell cycle progression protein 1 FIR2