SMTL ID : 7d8a.1

Crystal Structure of H3(1-13)/PHF14-PZP fusion protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.147, C.152, C.184, H.187 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.147, A:C.152, A:C.184, A:H.187 ZN.2: 4 residues within 4Å: Chain A: C.74, C.77, H.94, C.97 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.74, A:C.77, A:H.94, A:C.97 ZN.3: 4 residues within 4Å: Chain A: C.130, C.133, H.157, C.160 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.130, A:C.133, A:H.157, A:C.160 ZN.4: 4 residues within 4Å: Chain A: C.11, C.14, H.36, C.39 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.14, A:H.36, A:C.39 ZN.5: 4 residues within 4Å: Chain A: C.28, C.31, C.63, C.66 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.28, A:C.31, A:C.63, A:C.66

2 x CA: CALCIUM ION(Non-covalent)

CA.6: 3 residues within 4Å: Chain A: Y.100, D.178, F.180 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.178, A:F.180, H2O.2, H2O.2, H2O.3, H2O.3 CA.7: 4 residues within 4Å: Chain A: A.98, L.99, V.101, V.104 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:A.98, A:L.99, A:V.101, A:V.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, S. et al., Molecular basis for bipartite recognition of histone H3 by the PZP domain of PHF14. Nucleic Acids Res. (2021)

Release Date

2021-07-28

Peptides

PHD finger protein 14: A
Gene for histone H3 (germline gene): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

PHD finger protein 14

Gene for histone H3 (germline gene)