SMTL ID : 7dds.1

Ancestral myoglobin aMbSp of Puijila Darwini relative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 21 residues within 4Å: Chain A: L.33, T.40, K.43, F.44, K.46, H.65, T.68, V.69, A.72, L.73, I.76, L.90, S.93, H.94, H.98, I.100, Y.104, L.105, I.108, I.112, F.139 22 PLIP interactions: 21 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:F.44, A:F.44, A:F.44, A:T.68, A:V.69, A:A.72, A:L.90, A:I.100, A:I.100, A:Y.104, A:L.105, A:F.139, A:F.139 Hydrogen bonds: A:S.93 Salt bridges: A:K.46, A:H.65, A:H.94, A:H.98 pi-Stacking: A:H.65, A:H.98 Metal complexes: A:H.94, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Isogai, Y. et al., Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals. Iscience (2021)

Release Date

2021-09-08

Peptides

Ancestral myoglobin aMbSp: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ancestral myoglobin aMbSp

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