SMTL ID : 7dia.1

Falcilysin in complex with mefloquine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x H8O: (S)-[2,8-bis(trifluoromethyl)quinolin-4-yl]-[(2S)-piperidin-2-yl]methanol(Non-covalent)

H8O.1: 12 residues within 4Å: Chain A: F.47, Y.378, D.416, I.475, I.478, L.479, A.482, D.491, F.492, E.495, I.509, F.510 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.475, A:I.478, A:A.482, A:D.491 Hydrogen bonds: A:D.416 Water bridges: A:Y.378

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: L.844, F.955, D.956, E.957, G.978, I.979, E.1127, K.1130, N.1131 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:F.955, A:I.979, A:I.979, A:N.1131, A:N.1131 Water bridges: A:K.773, A:K.773

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: G.114, E.117, N.1000, W.1004 Ligands: EDO.6 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.117, A:W.1004 Hydrogen bonds: A:G.114 Water bridges: A:E.117 ACT.5: 5 residues within 4Å: Chain A: H.767, L.768, Y.1022, E.1094, F.1102 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.1022, A:F.1102 Hydrogen bonds: A:E.1094 Water bridges: A:D.765, A:D.765, A:D.765, A:D.765, A:D.765, A:N.769 ACT.9: 5 residues within 4Å: Chain A: Y.1002, T.1006, A.1041, T.1042, E.1045 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.1041 Hydrogen bonds: A:Y.1002, A:E.1045

1 x YMZ: Mefloquine(Non-covalent)

YMZ.4: 9 residues within 4Å: Chain A: Y.833, A.834, M.837, G.1015, V.1016, F.1017, L.1029, A.1031 Ligands: EDO.6 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.1017, A:F.1017 Halogen bonds: A:Y.833

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 7 residues within 4Å: Chain A: K.999, N.1000, W.1004, G.1015, V.1016 Ligands: ACT.3, YMZ.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.1000, A:V.1016 EDO.7: 6 residues within 4Å: Chain A: I.191, P.192, Q.193, K.568, I.571, E.572 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.193, A:Q.193, A:E.572, A:E.572, A:E.572 EDO.8: 2 residues within 4Å: Chain A: R.1044, E.1129 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.1129 Water bridges: A:R.1044 EDO.10: 6 residues within 4Å: Chain A: N.207, E.208, G.1012, Y.1014, R.1032, P.1034 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.1014, A:R.1032 Water bridges: A:N.207

1 x ZN: ZINC ION(Non-covalent)

ZN.11: 3 residues within 4Å: Chain A: H.94, H.98, E.208 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.94, A:H.98, A:E.208, H2O.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, J.Q., Protease in complex with inhibitor. To Be Published

Release Date

2021-12-01

Peptides

Falcilysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Falcilysin

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