SMTL ID : 7dpo.1

Crystal Structure of BRD2(BD2)with Ligand ZB-BD-224 bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x HFU: 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4,5-dihydro-2,3a1,5-triazadibenzo[cd,h]azulen-1(2H)-one(Non-covalent)

HFU.1: 13 residues within 4Å: Chain A: W.27, P.28, F.29, K.31, P.32, V.33, D.34, L.38, L.40, C.82, N.86, H.90, M.95 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.27, A:W.27, A:W.27, A:P.28, A:F.29, A:V.33, A:L.38, A:L.38 Hydrogen bonds: A:N.86, A:N.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Z. et al., Structure Base Design of A new chemotype of Four-Cycle Compounds as Bromodomain and Extra-Terminal (BET) Inhibitors with The Second Bromodomain Bias and Highly Anti-inflammatory Potency. To Be Published

Release Date

2021-12-22

Peptides

Bromodomain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 2

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