- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.44 Å
- Oligo State
- hetero-2-1-2-1-mer
- Ligands
- 2 x MCN: PTERIN CYTOSINE DINUCLEOTIDE(Non-covalent)
- 2 x MO: MOLYBDENUM ATOM(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.3: 29 residues within 4Å:- Chain B: K.29, I.30, I.31, A.32, G.33, G.34, Q.35, S.36, L.37, H.78, I.101, A.102, I.106, G.110, T.111, G.113, G.114, S.115, A.117, H.118, A.123, E.124, L.166, I.167, G.191, Y.193
- Chain C: H.44, G.45, V.46
24 PLIP interactions:23 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:A.102, B:I.106, C:V.46
- Hydrogen bonds: B:K.29, B:K.29, B:A.32, B:G.33, B:G.34, B:G.34, B:Q.35, B:S.36, B:S.36, B:L.37, B:A.102, B:T.111, B:T.111, B:T.111, B:S.115, B:H.118, B:E.124, B:E.124, B:I.167, B:I.167, B:Y.193
FAD.6: 25 residues within 4Å:- Chain D: K.29, I.30, I.31, G.33, G.34, Q.35, S.36, L.37, H.78, I.101, A.102, I.106, G.110, T.111, G.113, G.114, S.115, A.117, A.122, A.123, E.124, L.166, I.167, Y.193
- Chain F: M.713
22 PLIP interactions:22 interactions with chain D- Hydrophobic interactions: D:I.101, D:I.101, D:A.123, D:E.124, D:Y.193
- Hydrogen bonds: D:K.29, D:I.30, D:I.30, D:G.33, D:G.34, D:Q.35, D:Q.35, D:S.36, D:S.36, D:L.37, D:H.78, D:T.111, D:T.111, D:G.114, D:S.115, D:I.167, D:I.167
- 4 x FES: FE2/S2 (INORGANIC) CLUSTER(Covalent)(Non-covalent)
FES.4: 10 residues within 4Å:- Chain C: V.40, C.42, E.43, G.45, V.46, C.47, G.48, C.50, R.60, C.62
5 PLIP interactions:5 interactions with chain C,- Metal complexes: C:C.42, C:C.47, C:C.50, C:C.50, C:C.62
FES.5: 8 residues within 4Å:- Chain A: M.216
- Chain C: Q.100, C.101, C.104, C.137, R.138, C.139
- Ligands: MCN.1
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.101, C:C.104, C:C.137, C:C.139
FES.7: 10 residues within 4Å:- Chain E: V.40, C.42, E.43, G.45, V.46, C.47, G.48, C.50, R.60, C.62
5 PLIP interactions:5 interactions with chain E,- Metal complexes: E:C.42, E:C.47, E:C.50, E:C.50, E:C.62
FES.8: 8 residues within 4Å:- Chain E: Q.100, C.101, C.104, C.137, R.138, C.139
- Chain F: M.216
- Ligands: MCN.9
4 PLIP interactions:4 interactions with chain E,- Metal complexes: E:C.101, E:C.104, E:C.137, E:C.139
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lei, W., crystal structure of xanthine dehydrogenase family protein. To Be Published
- Release Date
- 2022-01-26
- Peptides
- 6-hydroxypseudooxynicotine dehydrogenase complex subunit gamma: AF
6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha: B
6-hydroxypseudooxynicotine dehydrogenase complex subunit beta: CE
6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AF
DB
BC
CE
FD
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.44 Å
- Oligo State
- hetero-2-1-2-1-mer
- Ligands
- 2 x MCN: PTERIN CYTOSINE DINUCLEOTIDE(Non-covalent)
- 2 x MO: MOLYBDENUM ATOM(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 4 x FES: FE2/S2 (INORGANIC) CLUSTER(Covalent)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lei, W., crystal structure of xanthine dehydrogenase family protein. To Be Published
- Release Date
- 2022-01-26
- Peptides
- 6-hydroxypseudooxynicotine dehydrogenase complex subunit gamma: AF
6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha: B
6-hydroxypseudooxynicotine dehydrogenase complex subunit beta: CE
6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AF
DB
BC
CE
FD
E