- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 80 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 22 residues within 4Å:- Chain A: F.678, A.681, F.682, L.684, M.685, F.688, Y.693, W.694, L.697
- Chain B: S.423, S.426, L.427, G.430, F.431, L.528, L.535, I.536, L.581, F.584, W.585
- Ligands: CLA.54, BCR.94
15 PLIP interactions:7 interactions with chain B, 8 interactions with chain A,- Hydrophobic interactions: B:L.427, B:I.536, B:L.581, B:L.581, B:F.584, A:F.678, A:A.681, A:F.682, A:L.684, A:F.688, A:Y.693, A:W.694
- Hydrogen bonds: B:F.431
- pi-Stacking: B:W.585, A:F.682
CLA.3: 18 residues within 4Å:- Chain A: W.29, P.32, I.49, L.52, H.53
- Chain F: I.144
- Chain H: Y.6, T.9, A.10, P.11
- Ligands: CLA.4, CLA.8, CLA.11, CLA.41, CLA.42, PQN.44, LHG.52, BCR.100
8 PLIP interactions:3 interactions with chain H, 4 interactions with chain A, 1 interactions with chain F,- Hydrophobic interactions: H:Y.6, H:T.9, H:P.11, A:P.32, A:I.49, A:L.52, F:I.144
- Metal complexes: A:H.53
CLA.4: 17 residues within 4Å:- Chain A: W.29, H.34, H.53, V.56, H.57, F.59, Y.62, A.76, G.79, H.80, V.83
- Ligands: CLA.3, CLA.5, CLA.6, CLA.11, CLA.30, LHG.52
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:H.53, A:V.56, A:V.83
- Salt bridges: A:H.34
- Metal complexes: A:H.57
CLA.5: 27 residues within 4Å:- Chain A: H.57, F.59, I.73, A.76, H.77, H.80, L.81, V.84, F.85, L.88, M.169, W.349, H.350, Q.352, L.353, N.356, L.357, F.360
- Ligands: CLA.4, CLA.6, CLA.13, CLA.14, CLA.25, CLA.29, CLA.30, BCR.47, BCR.48
21 PLIP interactions:21 interactions with chain A,- Hydrophobic interactions: A:H.57, A:F.59, A:I.73, A:I.73, A:I.73, A:A.76, A:H.77, A:L.81, A:V.84, A:F.85, A:F.85, A:L.88, A:W.349, A:W.349, A:Q.352, A:L.353, A:F.360
- Hydrogen bonds: A:N.356
- Salt bridges: A:H.80
- pi-Stacking: A:H.80
- Metal complexes: A:H.77
CLA.6: 16 residues within 4Å:- Chain A: H.57, H.80, V.84, W.87, F.360, F.400, L.401
- Ligands: CLA.4, CLA.5, CLA.11, CLA.28, CLA.29, CLA.30, BCR.48, LHG.52, BCR.99
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:V.84, A:W.87, A:W.87, A:F.360, A:F.400
- Salt bridges: A:H.57
- Metal complexes: A:H.80
CLA.7: 14 residues within 4Å:- Chain A: I.86, W.87, S.89, G.90, F.93, H.94, F.98, V.117, W.119
- Chain H: F.19
- Ligands: CLA.8, CLA.9, BCR.99, BCR.100
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: A:F.93, A:F.93, A:F.98, A:W.119, H:F.19
- Salt bridges: A:H.94
- pi-Stacking: A:F.98
- Metal complexes: A:H.94
CLA.8: 24 residues within 4Å:- Chain A: W.87, A.91, A.115, Q.116, I.138, Q.139, I.140, T.141, S.142, L.144, A.668, Y.669, W.741
- Ligands: CLA.3, CLA.7, CLA.9, CLA.11, CLA.28, CLA.30, CLA.42, BCR.51, LHG.52, CLA.54, BCR.99
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:I.138, A:I.138, A:A.668, A:Y.669, A:Y.669, A:W.741
- Hydrogen bonds: A:T.141, A:S.142
CLA.9: 18 residues within 4Å:- Chain A: Q.116, V.117, V.118, W.119, Q.124, L.127, I.138, A.668, L.671
- Chain B: V.442, F.446
- Chain H: I.26
- Ligands: CLA.7, CLA.8, CLA.28, CLA.80, BCR.99, BCR.100
10 PLIP interactions:2 interactions with chain B, 6 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: B:V.442, A:I.138, A:A.668, A:L.671, H:I.26, H:I.26
- pi-Stacking: B:F.446
- Hydrogen bonds: A:Q.116, A:W.119, A:Q.124
CLA.10: 15 residues within 4Å:- Chain A: I.15, I.17, F.74, F.78, L.172, M.173, F.175, A.176, F.179, H.180, A.184, P.186, W.190
- Ligands: CLA.12, CLA.13
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:I.15, A:I.17, A:F.74, A:F.78, A:L.172, A:F.175, A:A.176, A:F.179, A:P.186, A:W.190
- Metal complexes: A:H.180
CLA.11: 24 residues within 4Å:- Chain A: V.22, S.23, T.24, S.25, F.26, K.28, W.29, H.34, K.72, S.75, G.79, L.174, G.177, W.178, Y.181, H.182
- Chain H: Y.6
- Ligands: CLA.3, CLA.4, CLA.6, CLA.8, LHG.52, BCR.99, BCR.100
12 PLIP interactions:1 interactions with chain H, 11 interactions with chain A,- Hydrophobic interactions: H:Y.6, A:T.24, A:F.26, A:K.28, A:W.29, A:L.174, A:W.178, A:Y.181
- Salt bridges: A:K.28, A:H.34, A:K.72
- Metal complexes: A:H.182
CLA.12: 12 residues within 4Å:- Chain A: K.14, I.15, W.190, N.193, S.196, H.200, T.314, W.316
- Ligands: CLA.10, CLA.13, CLA.20, BCR.48
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.15, A:T.314, A:W.316
- Hydrogen bonds: A:S.196
- Metal complexes: A:H.200
CLA.13: 18 residues within 4Å:- Chain A: F.74, H.77, F.78, L.81, W.190, F.191, N.193, M.197, H.200, H.201, G.204, L.205
- Ligands: CLA.5, CLA.10, CLA.12, CLA.25, CLA.29, BCR.48
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:W.190, A:W.190, A:F.191, A:M.197, A:L.205
- Salt bridges: A:H.77
- Metal complexes: A:H.201
CLA.14: 15 residues within 4Å:- Chain A: G.152, I.153, Q.158, V.161, T.162, S.212, W.213, H.216, V.220, P.240
- Ligands: CLA.5, CLA.15, CLA.16, BCR.47, BCR.48
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:W.213, A:H.216
- Hydrogen bonds: A:Q.158
- pi-Stacking: A:W.213
- Metal complexes: A:H.216
CLA.15: 16 residues within 4Å:- Chain A: L.211, S.212, G.215, I.218, H.219, F.243, I.244, K.247, F.257, G.260, L.261, F.264, Y.272, L.299
- Ligands: CLA.14, BCR.46
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:L.211, A:I.218, A:F.257, A:L.261, A:L.261, A:F.264, A:Y.272, A:Y.272
- Hydrogen bonds: A:K.247
- Salt bridges: A:H.219, A:K.247
- Metal complexes: A:H.219
CLA.16: 7 residues within 4Å:- Chain A: L.157, V.161, L.239, H.241, L.245
- Ligands: CLA.14, BCR.47
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:H.241, A:L.245
- Salt bridges: A:H.241
- pi-Stacking: A:H.241
- pi-Cation interactions: A:H.241
CLA.17: 15 residues within 4Å:- Chain A: F.264, W.269, Y.272, L.276, F.278, H.296, L.299, A.300, V.303, L.304, N.501
- Ligands: CLA.18, CLA.22, CLA.36, BCR.46
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:F.264, A:W.269, A:W.269, A:W.269, A:L.276, A:L.276, A:L.299, A:L.299, A:A.300, A:V.303, A:V.303
- Salt bridges: A:H.296
- Metal complexes: A:H.296
CLA.18: 22 residues within 4Å:- Chain A: T.277, F.278, G.280, G.281, L.289, D.293, S.294, H.296, H.297, A.300, I.301, L.304, H.370, M.374, P.376, N.505, A.506
- Ligands: CLA.17, CLA.19, CLA.27, CLA.35, CLA.36
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.278, A:F.278, A:L.289, A:D.293, A:H.297, A:A.300, A:I.301
- Metal complexes: A:H.297
CLA.19: 23 residues within 4Å:- Chain A: A.150, L.205, F.206, G.209, S.210, W.213, Q.217, L.291, H.297, H.298, I.301, F.305, L.363, V.367, H.370, P.376, Y.377
- Ligands: CLA.18, CLA.21, CLA.27, CLA.29, CLA.35, BCR.48
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:F.206, A:W.213, A:I.301, A:F.305, A:F.305, A:F.305, A:L.363, A:V.367, A:P.376, A:P.376
- Salt bridges: A:H.298
- pi-Stacking: A:W.213, A:H.297
- Metal complexes: A:H.298
CLA.20: 14 residues within 4Å:- Chain A: N.199, H.200, G.203, L.208, I.306, H.310, Y.312, T.314, W.316, I.318
- Ligands: CLA.12, BCR.46, BCR.47, BCR.48
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:N.199, A:L.208, A:L.208, A:I.306, A:I.318
- Hydrogen bonds: A:N.199
- Metal complexes: A:H.310
CLA.21: 22 residues within 4Å:- Chain A: M.198, L.202, L.304, F.305, M.311, Y.312, M.322, M.325, Y.326, L.359, V.430, L.551, V.554, L.555
- Ligands: CLA.19, CLA.22, CLA.23, CLA.24, CLA.25, CLA.27, BCR.49, BCR.50
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:L.202, A:F.305, A:L.359, A:V.430, A:L.551, A:V.554, A:L.555
- Hydrogen bonds: A:Y.312
CLA.22: 10 residues within 4Å:- Chain A: V.307, H.310, M.311, I.318, G.319, H.320
- Ligands: CLA.17, CLA.21, CLA.23, BCR.46
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:M.311, A:I.318
- Hydrogen bonds: A:G.319
- Salt bridges: A:H.320
- Metal complexes: A:H.320
CLA.23: 10 residues within 4Å:- Chain A: M.311, H.320, E.324, M.325, S.328, H.329
- Ligands: CLA.21, CLA.22, CLA.24, CLA.43
2 PLIP interactions:2 interactions with chain A,- Salt bridges: A:H.329
- Metal complexes: A:H.329
CLA.24: 16 residues within 4Å:- Chain A: Y.326, H.329, T.334, H.338, V.341, L.426, V.427, V.430
- Ligands: CLA.21, CLA.23, CLA.25, CLA.31, CLA.43, BCR.49, BCR.50, LHG.53
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:Y.326, A:T.334, A:V.341, A:V.341, A:V.427, A:V.430
- Salt bridges: A:H.329
- Metal complexes: A:H.338
CLA.25: 29 residues within 4Å:- Chain A: L.188, F.191, Q.192, A.194, M.197, M.198, H.201, L.205, F.206, M.322, Y.326, Y.342, F.345, T.346, N.347, S.348, W.349, Q.352, L.355, N.356, L.359, F.360
- Ligands: CLA.5, CLA.13, CLA.21, CLA.24, CLA.27, CLA.29, BCR.49
18 PLIP interactions:18 interactions with chain A,- Hydrophobic interactions: A:L.188, A:Q.192, A:A.194, A:M.197, A:L.205, A:Y.326, A:Y.342, A:F.345, A:F.345, A:T.346, A:W.349, A:W.349, A:W.349, A:W.349, A:Q.352, A:L.355, A:N.356, A:L.359
CLA.26: 15 residues within 4Å:- Chain A: I.365, I.366, H.369, G.399, I.402, I.543, T.546, V.547, M.599, L.603
- Ligands: CLA.27, CLA.37, CLA.38, CLA.39, BCR.50
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:I.365, A:I.365, A:I.402, A:I.402, A:I.543, A:I.543, A:V.547, A:L.603
- Salt bridges: A:H.369
CLA.27: 20 residues within 4Å:- Chain A: L.304, L.359, L.363, I.366, H.369, H.370, S.373, M.374, A.506, S.507, F.510
- Ligands: CLA.18, CLA.19, CLA.21, CLA.25, CLA.26, CLA.35, CLA.37, CLA.39, BCR.50
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:L.304, A:L.359, A:L.363, A:I.366, A:A.506, A:F.510, A:F.510
- Metal complexes: A:H.370
CLA.28: 21 residues within 4Å:- Chain A: W.87, T.141, S.142, C.389, T.392, H.393, W.396, I.397, F.400, M.672, I.737, W.741, H.745
- Ligands: CLA.6, CLA.8, CLA.9, CLA.29, BCR.51, LHG.52, CLA.54, BCR.99
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:H.393, A:I.397, A:F.400, A:W.741
- Hydrogen bonds: A:S.142
- Salt bridges: A:H.745
- Metal complexes: A:H.393
CLA.29: 24 residues within 4Å:- Chain A: W.87, L.88, S.142, G.143, L.144, M.147, F.206, F.360, L.363, S.364, V.367, M.371, Y.377, L.390, H.393, H.394, I.397
- Ligands: CLA.5, CLA.6, CLA.13, CLA.19, CLA.25, CLA.28, BCR.48
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:W.87, A:L.144, A:F.206, A:F.206, A:F.360, A:F.360, A:F.360, A:F.360, A:L.363, A:V.367
- Hydrogen bonds: A:Y.377
- pi-Stacking: A:H.393
- Metal complexes: A:H.394
CLA.30: 28 residues within 4Å:- Chain A: H.53, A.54, V.56, H.57, D.58, L.353, L.357, F.400, L.401, G.404, A.407, H.408, I.411, R.415, F.571, R.572, W.589, V.592, L.596, L.734
- Ligands: CLA.4, CLA.5, CLA.6, CLA.8, CLA.42, BCR.51, LHG.52, CLA.54
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:D.58, A:L.353, A:L.353, A:L.357, A:L.357, A:L.401, A:A.407, A:V.592, A:L.596, A:L.734
- Hydrogen bonds: A:V.56, A:H.57, A:D.58, A:R.572
- Salt bridges: A:H.57, A:R.572
- Metal complexes: A:H.408
CLA.31: 16 residues within 4Å:- Chain A: F.333, T.334, L.426, R.429, V.430, R.432, H.433, I.437, H.440
- Chain I: L.18, T.20, I.22
- Ligands: CLA.24, CLA.32, CLA.39, LHG.53
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:L.426, A:I.437, A:I.437, A:H.440, I:T.20
- Hydrogen bonds: A:R.429
- Salt bridges: A:R.429, A:R.432, A:H.433
- Metal complexes: A:H.433
CLA.32: 21 residues within 4Å:- Chain A: A.436, H.440, W.443
- Chain B: W.683, A.684, R.687, T.688, P.689
- Chain D: T.92
- Chain I: L.18, I.22, V.28, L.31, L.32
- Ligands: CLA.31, CLA.38, CLA.39, CLA.56, BCR.102, CLA.104, BCR.107
9 PLIP interactions:4 interactions with chain I, 5 interactions with chain A,- Hydrophobic interactions: I:I.22, I:V.28, I:L.31, I:L.32, A:W.443, A:W.443, A:W.443
- Salt bridges: A:H.440
- Metal complexes: A:H.440
CLA.33: 19 residues within 4Å:- Chain A: W.443, I.446, F.447, F.450, H.451
- Chain B: I.21
- Chain I: L.66
- Ligands: CLA.34, CLA.38, CLA.56, CLA.85, CLA.86, PQN.87, BCR.90, BCR.97, BCR.102, CLA.104, CLA.105, BCR.106
9 PLIP interactions:7 interactions with chain A, 1 interactions with chain I, 1 interactions with chain B,- Hydrophobic interactions: A:W.443, A:F.447, A:F.447, A:F.450, A:F.450, I:L.66, B:I.21
- Salt bridges: A:H.451
- Metal complexes: A:H.451
CLA.34: 28 residues within 4Å:- Chain A: F.450, G.454, L.455, I.457, H.458, T.461, M.462, R.467, D.470, F.472, I.477
- Chain B: H.95
- Chain I: L.59, P.62, F.63, L.66, G.67, P.68, R.70
- Ligands: CLA.33, CLA.58, CLA.64, CLA.65, BCR.97, BCR.102, CLA.104, CLA.105, BCR.107
15 PLIP interactions:8 interactions with chain A, 7 interactions with chain I,- Hydrophobic interactions: A:F.450, A:L.455, A:H.458, I:L.59, I:P.62, I:P.62, I:F.63, I:L.66, I:L.66
- Hydrogen bonds: A:R.467, A:R.467
- Salt bridges: A:H.458, A:R.467, I:R.70
- Metal complexes: A:H.458
CLA.35: 15 residues within 4Å:- Chain A: W.486, V.487, V.490, N.491, A.494, T.498, A.499, A.506, F.510
- Ligands: CLA.18, CLA.19, CLA.27, CLA.36, CLA.37, BCR.50
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.486, A:W.486, A:V.487, A:V.490, A:T.498, A:F.510
CLA.36: 10 residues within 4Å:- Chain A: F.278, T.498, A.499, P.500, N.501, A.502
- Ligands: CLA.17, CLA.18, CLA.35, BCR.50
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:A.499, A:P.500
- Metal complexes: A:T.498
CLA.37: 20 residues within 4Å:- Chain A: H.369, Y.372, F.483, A.484, V.487, Q.488, F.510, I.526, L.528, H.536, H.539, I.543, V.606, H.609, F.610
- Ligands: CLA.26, CLA.27, CLA.35, CLA.38, CLA.39
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:Y.372, A:A.484, A:I.526, A:L.528, A:L.528, A:H.539, A:I.543, A:V.606, A:F.610
- Hydrogen bonds: A:Q.488
- pi-Cation interactions: A:H.609
- Metal complexes: A:H.536
CLA.38: 20 residues within 4Å:- Chain A: V.444, F.447, L.448, Q.480, P.481, V.482, F.483, A.484, D.532, F.533, H.536, H.537, A.540, H.544
- Ligands: CLA.26, CLA.32, CLA.33, CLA.37, CLA.39, CLA.104
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:V.444, A:F.447, A:F.447, A:L.448, A:L.448, A:L.448, A:V.482, A:F.483, A:F.483
- Hydrogen bonds: A:F.483, A:A.484
- Salt bridges: A:H.536
- pi-Stacking: A:F.533
- Metal complexes: A:H.537
CLA.39: 14 residues within 4Å:- Chain A: I.437, L.441, W.443, V.444, A.540, I.543, H.544, V.547
- Ligands: CLA.26, CLA.27, CLA.31, CLA.32, CLA.37, CLA.38
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:I.437, A:L.441, A:W.443, A:V.444, A:I.543, A:V.547, A:V.547
- Salt bridges: A:H.544
- Metal complexes: A:H.544
CLA.40: 18 residues within 4Å:- Chain A: I.701, A.704, H.705, L.708, F.710
- Chain B: S.420, S.423, W.424, L.427
- Chain F: G.123, G.126, Y.129
- Ligands: CLA.41, CLA.42, CLA.78, CLA.79, BCR.94, BCR.95
7 PLIP interactions:5 interactions with chain A, 1 interactions with chain B, 1 interactions with chain F,- Hydrophobic interactions: A:I.701, A:I.701, A:L.708, A:F.710, B:L.427, F:Y.129
- Metal complexes: A:H.705
CLA.41: 23 residues within 4Å:- Chain A: T.46, I.49, W.50, I.701, V.702, H.705, F.710, P.712, P.716, R.717
- Chain F: G.126, Y.129, L.130, E.143, I.146
- Chain H: A.10, I.13, G.14, T.17
- Ligands: CLA.3, CLA.40, PQN.44, BCR.94
11 PLIP interactions:2 interactions with chain F, 8 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: F:I.146, A:T.46, A:W.50, A:I.701, A:V.702, A:F.710, A:P.712, A:P.716, A:P.716, H:T.17
- Hydrogen bonds: F:E.143
CLA.42: 22 residues within 4Å:- Chain A: W.50, I.679, F.682, L.719, Q.723, A.726, V.727, A.730, H.731, L.734
- Chain H: A.18, A.22
- Ligands: CLA.3, CLA.8, CLA.30, CLA.40, PQN.44, BCR.51, LHG.52, CLA.80, BCR.94, BCR.99
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: A:W.50, A:I.679, A:F.682, A:L.719, A:V.727, A:V.727, H:A.22
- Hydrogen bonds: A:Q.723
- Metal complexes: A:H.731
CLA.43: 8 residues within 4Å:- Chain A: H.329, K.330, P.332, F.333
- Ligands: CLA.23, CLA.24, BCR.49, LHG.53
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:F.333
- pi-Stacking: A:F.333
CLA.54: 26 residues within 4Å:- Chain A: L.671, L.674, G.675, H.677, F.678, W.680, A.681
- Chain B: L.434, V.438, D.441, L.528, F.584, W.585, N.588, W.592, L.619, F.623, L.627, W.660
- Ligands: CL0.1, CLA.2, CLA.8, CLA.28, CLA.30, BCR.51, CLA.57
14 PLIP interactions:9 interactions with chain B, 5 interactions with chain A,- Hydrophobic interactions: B:L.434, B:V.438, B:L.528, B:W.585, B:W.585, B:N.588, B:W.592, B:L.619, B:W.660, A:L.671, A:F.678, A:W.680, A:A.681
- Salt bridges: A:H.677
CLA.55: 27 residues within 4Å:- Chain A: F.453, I.457, D.460, F.541, F.597, W.598, Y.600, N.601, I.643, L.647, W.680, Y.732
- Chain B: W.651, L.654, F.655, H.657, L.658, W.660, A.661
- Ligands: CL0.1, CLA.57, CLA.58, CLA.64, CLA.65, CLA.86, BCR.90, BCR.97
23 PLIP interactions:16 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: A:F.453, A:F.453, A:I.457, A:I.457, A:D.460, A:F.541, A:F.597, A:W.598, A:W.598, A:W.598, A:Y.600, A:N.601, A:I.643, A:I.643, A:W.680, A:Y.732, B:W.651, B:W.651, B:L.654, B:L.658, B:W.660, B:A.661
- Salt bridges: B:H.657
CLA.56: 22 residues within 4Å:- Chain A: S.439, N.442, W.443, I.446
- Chain B: L.681, A.684, H.685, T.688, A.691, V.694
- Chain I: H.55, F.58, L.59, L.90, W.127
- Ligands: CLA.32, CLA.33, CLA.85, BCR.90, BCR.102, CLA.104, BCR.106
9 PLIP interactions:4 interactions with chain I, 1 interactions with chain A, 4 interactions with chain B,- Hydrophobic interactions: I:F.58, I:L.59, I:L.90, I:W.127, A:I.446, B:L.681, B:T.688, B:A.691
- pi-Stacking: B:H.685
CLA.57: 26 residues within 4Å:- Chain A: L.647, L.651, W.652
- Chain B: T.433, L.434, Y.437, V.522, A.525, L.528, W.592, F.595, L.619, W.622, L.627, S.631, I.635, F.653, H.657, W.660, Y.720, T.723, Y.724, F.727
- Ligands: CL0.1, CLA.54, CLA.55
30 PLIP interactions:27 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:T.433, B:L.434, B:Y.437, B:Y.437, B:V.522, B:A.525, B:L.528, B:W.592, B:W.592, B:W.592, B:F.595, B:F.595, B:L.619, B:L.619, B:W.622, B:W.622, B:L.627, B:L.627, B:I.635, B:W.660, B:W.660, B:W.660, B:Y.720, B:T.723, B:F.727, A:L.647, A:L.651, A:L.651
- pi-Stacking: B:W.660
- Metal complexes: B:H.657
CLA.58: 30 residues within 4Å:- Chain A: N.442, C.445, I.446, G.449, F.450, F.453, G.454, I.457, F.541, V.545, L.548, I.549, L.594, F.597, W.598
- Chain B: L.658, A.661, T.662, F.664, M.665, I.668, Y.673, W.674, L.677
- Ligands: CLA.34, CLA.55, CLA.65, CLA.86, BCR.90, BCR.97
12 PLIP interactions:5 interactions with chain B, 7 interactions with chain A,- Hydrophobic interactions: B:A.661, B:F.664, B:I.668, B:Y.673, B:W.674, A:I.446, A:F.453, A:I.457, A:V.545, A:I.549, A:L.594, A:F.597
CLA.59: 20 residues within 4Å:- Chain B: F.5, G.24, I.25, A.28, N.29, F.31, N.34, K.45, S.49, I.56
- Chain J: L.22, A.25, L.28, Y.29
- Ligands: CLA.60, CLA.61, CLA.77, LMG.91, BCR.106, BCR.108
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain J,- Hydrophobic interactions: B:F.5, B:I.25, B:A.28, B:F.31, B:I.56, J:L.22, J:A.25, J:L.28
CLA.60: 24 residues within 4Å:- Chain B: N.29, F.31, E.32, Y.43, I.46, S.49, H.50, H.53, L.54, F.168, R.174, H.178, L.182, L.330, H.331, Q.333, L.334, A.337, L.338, L.341
- Ligands: CLA.59, CLA.61, CLA.67, CLA.77
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:F.31, B:F.31, B:Y.43, B:I.46, B:I.46, B:H.53, B:F.168, B:L.182, B:L.330, B:L.330, B:Q.333, B:L.334, B:L.334, B:L.341
- Salt bridges: B:H.53
- pi-Stacking: B:H.53
- Metal complexes: B:H.50
CLA.61: 14 residues within 4Å:- Chain B: N.29, H.53, I.56, I.57, W.60, F.381, L.382
- Ligands: CLA.59, CLA.60, CLA.62, CLA.75, CLA.76, CLA.77, LMG.91
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:I.57, B:W.60, B:W.60, B:F.381, B:F.381, B:L.382
- Hydrogen bonds: B:N.29
- Metal complexes: B:H.53
CLA.62: 24 residues within 4Å:- Chain B: L.59, W.60, S.62, G.63, F.66, H.67, W.70, Q.71, A.90, S.92
- Chain G: L.5, P.6, L.9, V.10, V.13
- Chain J: A.10, L.11, A.14
- Ligands: CLA.61, CLA.63, CLA.64, CLA.75, BCR.97, BCR.108
13 PLIP interactions:2 interactions with chain J, 4 interactions with chain G, 7 interactions with chain B,- Hydrophobic interactions: J:L.11, J:A.14, G:L.5, G:L.9, G:V.10, G:V.13, B:L.59, B:F.66, B:W.70, B:W.70
- Hydrogen bonds: B:Q.71
- Salt bridges: B:H.67
- Metal complexes: B:H.67
CLA.63: 20 residues within 4Å:- Chain B: W.60, N.64, V.68, A.88, H.89, N.114, I.115, S.116, Y.117, S.118, V.120, V.648, W.649, M.652
- Ligands: CLA.62, CLA.64, CLA.75, CLA.77, BCR.90, BCR.97
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.60, B:A.88, B:Y.117, B:V.648, B:W.649
- Hydrogen bonds: B:S.116, B:Y.117, B:S.118
- Metal complexes: B:H.89
CLA.64: 27 residues within 4Å:- Chain A: T.461, A.464, L.465
- Chain B: H.89, I.91, S.92, D.93, P.94, H.95, F.96, N.114, S.647, V.648, W.651
- Chain G: V.10, V.21, M.22
- Ligands: CLA.34, CLA.55, CLA.62, CLA.63, CLA.65, CLA.86, BCR.90, LMG.91, BCR.97, BCR.106
10 PLIP interactions:7 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:I.91, B:D.93, B:F.96, B:F.96, B:W.651, A:T.461, A:L.465, A:L.465
- Hydrogen bonds: B:S.92
- Metal complexes: B:D.93
CLA.65: 20 residues within 4Å:- Chain B: P.94, H.95
- Chain G: V.10, P.11, G.14, I.15, V.16
- Chain I: P.68, L.69, Y.78, L.81, S.82, G.85, V.88
- Ligands: CLA.34, CLA.55, CLA.58, CLA.64, BCR.97, BCR.102
9 PLIP interactions:3 interactions with chain G, 2 interactions with chain B, 4 interactions with chain I,- Hydrophobic interactions: G:I.15, G:I.15, G:V.16, B:P.94, I:P.68, I:Y.78, I:Y.78, I:V.88
- Metal complexes: B:H.95
CLA.66: 12 residues within 4Å:- Chain B: F.47, F.51, L.148, F.151, A.152, L.155, H.156, K.160, F.161, P.163, W.167
- Ligands: CLA.67
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:F.47, B:F.151, B:A.152, B:L.155, B:P.163, B:W.167, B:W.167
- Metal complexes: B:H.156
CLA.67: 19 residues within 4Å:- Chain B: F.47, H.50, F.51, L.54, W.123, W.167, F.168, N.170, S.173, R.174, H.177, H.178, L.182, F.183, I.344
- Ligands: CLA.60, CLA.66, CLA.72, CLA.76
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:F.47, B:W.123, B:W.167, B:W.167, B:W.167, B:F.168, B:R.174, B:R.174, B:L.182, B:F.183, B:F.183
- Hydrogen bonds: B:H.50
- Salt bridges: B:H.50
- Metal complexes: B:H.178
CLA.68: 20 residues within 4Å:- Chain B: Q.127, G.128, M.129, E.134, N.137, G.138, F.141, S.186, A.189, W.190, G.192, H.193, H.196, V.197, G.208, W.209, F.212
- Ligands: CLA.69, CLA.76, BCR.88
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:F.141, B:F.141, B:A.189, B:W.190, B:W.190, B:H.193, B:H.196, B:V.197, B:W.209, B:W.209, B:W.209, B:F.212
- Hydrogen bonds: B:W.209
- Salt bridges: B:H.193
- pi-Stacking: B:W.190, B:W.209
- Metal complexes: B:H.193
CLA.69: 16 residues within 4Å:- Chain B: L.188, A.189, T.191, G.192, V.195, H.196, F.212, L.213, V.215, A.216, P.217, H.218, G.221, L.222
- Ligands: CLA.68, BCR.88
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:L.188, B:L.188, B:T.191, B:P.217, B:H.218, B:L.222
- Salt bridges: B:H.196
- Metal complexes: B:H.196
CLA.70: 12 residues within 4Å:- Chain B: W.230, G.231, T.234, L.255, T.256, F.257, H.275, L.278, A.279, V.282, I.495
- Ligands: CLA.71
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:W.230, B:W.230, B:W.230, B:L.255, B:L.278, B:L.278, B:L.278, B:A.279, B:V.282, B:V.282
- Salt bridges: B:H.275
- Metal complexes: B:H.275
CLA.71: 20 residues within 4Å:- Chain B: T.256, F.257, G.259, G.260, L.268, D.272, H.275, H.276, A.279, I.280, L.283, H.351, I.355, P.357, W.496, W.500
- Ligands: CLA.70, CLA.72, CLA.74, CLA.81
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:F.257, B:F.257, B:L.268, B:L.268, B:H.275, B:A.279, B:I.280, B:I.355, B:W.496
- Hydrogen bonds: B:G.260
- Metal complexes: B:H.276
CLA.72: 20 residues within 4Å:- Chain B: W.123, T.126, Q.127, F.183, S.186, S.187, W.190, I.273, H.276, H.277, I.280, F.284, I.344, L.347, V.348, P.357, Y.358
- Ligands: CLA.67, CLA.71, CLA.76
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:W.190, B:W.190, B:I.273, B:I.280, B:F.284, B:F.284, B:F.284, B:I.344, B:L.347, B:L.347, B:V.348, B:P.357, B:P.357
- pi-Stacking: B:W.190, B:W.190, B:H.276
- Metal complexes: B:H.277
CLA.73: 17 residues within 4Å:- Chain B: V.343, S.346, L.347, Q.350, Q.376, M.383, F.387, L.530, T.533, T.534, L.537, T.589, I.590
- Ligands: CLA.74, CLA.82, CLA.84, BCR.89
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:M.383, B:F.387, B:T.534, B:L.537, B:T.589, B:I.590
- Hydrogen bonds: B:Q.350, B:Q.376
CLA.74: 17 residues within 4Å:- Chain B: L.336, A.340, V.343, I.344, L.347, Q.350, H.351, S.354, I.355, L.511, F.512
- Ligands: CLA.71, CLA.73, CLA.81, CLA.82, CLA.84, BCR.89
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:L.336, B:V.343, B:V.343, B:I.344, B:L.347, B:Q.350, B:L.511, B:F.512, B:F.512
- Metal complexes: B:H.351
CLA.75: 21 residues within 4Å:- Chain B: W.60, N.64, Y.117, S.118, A.370, T.373, H.374, Y.377, F.381, W.649, M.652, I.721, Y.724, A.725, L.728
- Ligands: CLA.61, CLA.62, CLA.63, CLA.76, CLA.77, LMG.91
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:A.370, B:T.373, B:H.374, B:Y.377, B:Y.377, B:F.381, B:I.721, B:I.721, B:Y.724, B:A.725, B:L.728
- Metal complexes: B:H.374
CLA.76: 23 residues within 4Å:- Chain B: I.57, W.60, T.61, S.118, G.119, W.123, S.186, A.189, I.344, T.345, V.348, M.352, Y.358, L.371, H.374, H.375, I.378
- Ligands: CLA.61, CLA.67, CLA.68, CLA.72, CLA.75, BCR.88
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:I.57, B:W.60, B:T.61, B:W.123, B:A.189, B:I.344, B:V.348
- Hydrogen bonds: B:Y.358
- pi-Stacking: B:H.374
- Metal complexes: B:H.375
CLA.77: 25 residues within 4Å:- Chain B: A.26, N.29, D.30, H.331, L.334, L.338, F.381, G.385, A.388, H.389, I.392, R.396, Y.558, W.576, F.579, F.655, V.718, V.722
- Ligands: CLA.59, CLA.60, CLA.61, CLA.63, CLA.75, CLA.86, LMG.91
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:D.30, B:L.334, B:L.334, B:L.338, B:L.338, B:F.381, B:A.388, B:Y.558, B:F.579, B:F.579, B:F.655, B:V.718, B:V.722
- Hydrogen bonds: B:N.29
- Salt bridges: B:R.396
- Metal complexes: B:H.389
CLA.78: 13 residues within 4Å:- Chain A: W.703, A.704, K.707, L.708
- Chain B: A.417, H.421, W.424
- Chain F: F.169, T.175
- Ligands: CLA.40, CLA.79, CLA.84, BCR.95
7 PLIP interactions:2 interactions with chain A, 2 interactions with chain F, 3 interactions with chain B,- Hydrophobic interactions: A:A.704, F:F.169, F:T.175, B:W.424, B:W.424
- Salt bridges: A:K.707
- Metal complexes: B:H.421
CLA.79: 22 residues within 4Å:- Chain B: W.424, L.427, F.428, F.431, H.432
- Chain F: F.108, P.111, G.112, F.115, L.116, A.119, I.122, G.123, W.161
- Ligands: CLA.40, BCR.51, CLA.78, CLA.80, CLA.83, BCR.94, BCR.95, BCR.101
14 PLIP interactions:5 interactions with chain B, 9 interactions with chain F,- Hydrophobic interactions: B:W.424, B:F.428, B:F.431, F:F.108, F:F.115, F:F.115, F:F.115, F:L.116, F:L.116, F:A.119, F:W.161
- Salt bridges: B:H.432
- Metal complexes: B:H.432
- pi-Stacking: F:F.115
CLA.80: 23 residues within 4Å:- Chain A: V.122
- Chain B: G.435, L.436, V.438, H.439, V.442, K.451, I.453
- Chain F: Y.81, I.118
- Chain H: L.21, L.25, N.29, D.34, L.35, L.36
- Ligands: CLA.9, CLA.42, BCR.51, CLA.79, BCR.94, BCR.99, BCR.101
14 PLIP interactions:6 interactions with chain H, 6 interactions with chain B, 1 interactions with chain A, 1 interactions with chain F,- Hydrophobic interactions: H:L.21, H:L.25, H:L.25, H:L.35, B:H.439, B:V.442, A:V.122, F:I.118
- Hydrogen bonds: H:D.34, H:L.35, B:K.451
- Salt bridges: B:H.439, B:K.451
- Metal complexes: B:H.439
CLA.81: 11 residues within 4Å:- Chain B: I.463, V.466, H.467, L.478, T.485, W.496, W.500
- Ligands: CLA.71, CLA.74, CLA.82, BCR.89
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:V.466, B:T.485
- pi-Stacking: B:H.467
- Metal complexes: B:H.467
CLA.82: 23 residues within 4Å:- Chain B: Q.350, Y.353, Y.372, Q.376, F.459, A.460, I.463, Q.464, F.512, L.513, I.515, H.523, I.526, L.530, T.593, Y.596, W.597, K.600
- Ligands: CLA.73, CLA.74, CLA.81, CLA.83, CLA.84
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:I.463, B:I.515, B:I.526, B:I.526, B:L.530, B:Y.596, B:Y.596, B:W.597, B:K.600
- Hydrogen bonds: B:Q.464
- Metal complexes: B:H.523
CLA.83: 21 residues within 4Å:- Chain B: F.428, L.429, E.456, P.457, V.458, F.459, A.460, F.520, H.523, H.524, A.527, H.531
- Chain F: T.98, F.108, T.109, L.113
- Ligands: CLA.79, CLA.82, CLA.84, BCR.95, BCR.101
16 PLIP interactions:4 interactions with chain F, 12 interactions with chain B,- Hydrophobic interactions: F:T.98, F:F.108, F:T.109, F:L.113, B:F.428, B:L.429, B:L.429, B:V.458, B:F.459, B:F.459, B:A.527
- Hydrogen bonds: B:F.459, B:A.460
- Salt bridges: B:H.523
- pi-Stacking: B:F.520
- Metal complexes: B:H.524
CLA.84: 12 residues within 4Å:- Chain B: L.422, V.425, A.527, L.530, H.531, T.534
- Ligands: CLA.73, CLA.74, CLA.78, CLA.82, CLA.83, BCR.89
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.422, B:L.422, B:V.425, B:T.534
- Salt bridges: B:H.531
- Metal complexes: B:H.531
CLA.85: 25 residues within 4Å:- Chain B: T.18, W.22, L.681, V.682, H.685, R.695, W.696, K.697, D.698, P.700, V.701
- Chain G: I.15, A.19, F.26, E.30
- Chain I: Y.97, A.100
- Ligands: CLA.33, CLA.56, CLA.86, PQN.87, BCR.90, BCR.97, BCR.102, BCR.106
10 PLIP interactions:3 interactions with chain G, 7 interactions with chain B,- Hydrophobic interactions: G:I.15, G:A.19, G:F.26, B:T.18, B:W.22, B:V.682, B:W.696, B:W.696, B:P.700
- Hydrogen bonds: B:K.697
CLA.86: 23 residues within 4Å:- Chain A: F.450
- Chain B: W.22, F.655, L.658, I.659, T.662, F.666, L.703, V.711, A.714, H.715
- Chain G: M.22
- Ligands: CLA.33, CLA.55, CLA.58, CLA.64, CLA.77, CLA.85, PQN.87, BCR.90, LMG.91, BCR.97, BCR.106
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:W.22, B:F.655, B:L.658, B:I.659, B:T.662, B:F.666, B:L.703, B:V.711
- Salt bridges: B:H.715
- Metal complexes: B:H.715
CLA.96: 8 residues within 4Å:- Chain B: F.459, W.462, F.474
- Chain F: D.99, G.100, R.101, W.102
- Ligands: BCR.95
6 PLIP interactions:2 interactions with chain F, 4 interactions with chain B,- Hydrophobic interactions: F:D.99, B:F.459, B:F.459, B:W.462, B:F.474
- Metal complexes: F:D.99
CLA.98: 8 residues within 4Å:- Chain H: F.19, F.20, G.23, L.24, E.27, R.30, F.31
- Ligands: BCR.100
7 PLIP interactions:7 interactions with chain H,- Hydrophobic interactions: H:F.19, H:F.20, H:F.31
- Salt bridges: H:R.30
- pi-Cation interactions: H:R.30, H:R.30
- Metal complexes: H:E.27
CLA.103: 10 residues within 4Å:- Chain I: L.31, N.34, L.35, R.39, L.49, E.50, M.53, A.54
- Ligands: CLA.104, BCR.107
4 PLIP interactions:4 interactions with chain I,- Hydrophobic interactions: I:L.31, I:L.35, I:M.53
- Metal complexes: I:E.50
CLA.104: 20 residues within 4Å:- Chain B: T.688, P.689, L.690
- Chain I: L.35, P.36, A.37, I.51, A.54, H.55, F.58
- Ligands: CLA.32, CLA.33, CLA.34, CLA.38, CLA.56, BCR.102, CLA.103, CLA.105, BCR.106, BCR.107
9 PLIP interactions:7 interactions with chain I, 2 interactions with chain B,- Hydrophobic interactions: I:L.35, I:A.37, I:I.51, I:F.58, I:F.58, B:P.689, B:L.690
- Salt bridges: I:H.55
- Metal complexes: I:H.55
CLA.105: 14 residues within 4Å:- Chain I: Y.57, F.58, G.61, P.62, V.64, E.65, L.66, A.138, L.141, L.142
- Ligands: CLA.33, CLA.34, CLA.104, BCR.107
8 PLIP interactions:8 interactions with chain I,- Hydrophobic interactions: I:Y.57, I:F.58, I:F.58, I:F.58, I:P.62, I:V.64, I:L.66
- Hydrogen bonds: I:Y.57
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.44: 14 residues within 4Å:- Chain A: M.685, F.686, G.690, R.691, W.694, R.717, A.718, L.719, S.720, G.724
- Ligands: CLA.3, CLA.41, CLA.42, BCR.94
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.686, A:F.686, A:R.691, A:W.694, A:L.719, A:L.719, A:L.719
- Hydrogen bonds: A:L.719
- pi-Stacking: A:W.694
PQN.87: 18 residues within 4Å:- Chain B: W.22, M.665, F.666, S.669, W.670, R.671, W.674, I.678, V.701, A.702, L.703, A.708
- Ligands: CLA.33, CLA.85, CLA.86, BCR.90, LMG.91, BCR.106
14 PLIP interactions:14 interactions with chain B- Hydrophobic interactions: B:W.22, B:W.22, B:F.666, B:F.666, B:W.674, B:W.674, B:W.674, B:I.678, B:L.703, B:L.703, B:L.703, B:A.708
- Hydrogen bonds: B:L.703
- pi-Stacking: B:W.674
- 3 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)
SF4.45: 11 residues within 4Å:- Chain A: C.575, G.577, C.584, I.721, R.725
- Chain B: C.562, G.564, C.571, W.670, I.705, R.709
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B,- Metal complexes: A:C.575, A:C.584, B:C.562, B:C.571
SF4.92: 13 residues within 4Å:- Chain C: C.21, P.22, T.23, V.25, L.26, C.48, V.49, G.50, C.51, K.52, R.53, C.54, V.67
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.21, C:C.48, C:C.51, C:C.54
SF4.93: 12 residues within 4Å:- Chain C: C.11, I.12, G.13, C.14, T.15, C.17, A.40, C.58, P.59, T.60, S.64, I.65
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.11, C:C.14, C:C.17, C:C.58
- 19 x BCR: BETA-CAROTENE(Non-covalent)
BCR.46: 13 residues within 4Å:- Chain A: L.211, L.261, F.264, V.303, I.306, V.307, H.310, I.318
- Ligands: CLA.15, CLA.17, CLA.20, CLA.22, BCR.47
Ligand excluded by PLIPBCR.47: 12 residues within 4Å:- Chain A: F.85, T.162, G.165, A.166, L.208, S.212
- Ligands: CLA.5, CLA.14, CLA.16, CLA.20, BCR.46, BCR.48
Ligand excluded by PLIPBCR.48: 12 residues within 4Å:- Chain A: G.204, L.208, G.209
- Ligands: CLA.5, CLA.6, CLA.12, CLA.13, CLA.14, CLA.19, CLA.20, CLA.29, BCR.47
Ligand excluded by PLIPBCR.49: 11 residues within 4Å:- Chain A: F.345, S.354, L.355, A.409, F.412
- Ligands: CLA.21, CLA.24, CLA.25, CLA.43, BCR.50, LHG.53
Ligand excluded by PLIPBCR.50: 15 residues within 4Å:- Chain A: A.358, S.362, I.402, G.406, A.409, L.550, L.551, V.554
- Ligands: CLA.21, CLA.24, CLA.26, CLA.27, CLA.35, CLA.36, BCR.49
Ligand excluded by PLIPBCR.51: 19 residues within 4Å:- Chain A: M.672, G.675, A.676, F.678, I.679, L.734, I.737, A.738, W.741
- Chain B: V.438
- Ligands: CLA.8, CLA.28, CLA.30, CLA.42, CLA.54, CLA.79, CLA.80, BCR.94, BCR.99
Ligand excluded by PLIPBCR.88: 14 residues within 4Å:- Chain B: L.65, W.123, W.124, Q.127, M.129, G.138, F.141, L.142, L.145, W.209, L.213
- Ligands: CLA.68, CLA.69, CLA.76
Ligand excluded by PLIPBCR.89: 12 residues within 4Å:- Chain B: F.332, A.339, V.343, M.383, A.386, G.390, F.393, L.394
- Ligands: CLA.73, CLA.74, CLA.81, CLA.84
Ligand excluded by PLIPBCR.90: 14 residues within 4Å:- Chain A: I.446
- Chain B: W.651, M.652, F.655, W.674
- Ligands: CLA.33, CLA.55, CLA.56, CLA.58, CLA.63, CLA.64, CLA.85, CLA.86, PQN.87
Ligand excluded by PLIPBCR.94: 18 residues within 4Å:- Chain A: M.685, I.698
- Chain B: L.427, F.431
- Chain F: P.111, L.114, F.115, I.118
- Ligands: CLA.2, CLA.40, CLA.41, CLA.42, PQN.44, BCR.51, CLA.79, CLA.80, BCR.99, BCR.101
Ligand excluded by PLIPBCR.95: 12 residues within 4Å:- Chain A: L.708
- Chain F: T.98, G.100, G.120, G.123, W.124, W.161
- Ligands: CLA.40, CLA.78, CLA.79, CLA.83, CLA.96
Ligand excluded by PLIPBCR.97: 14 residues within 4Å:- Chain G: V.13, G.14, P.18
- Ligands: CLA.33, CLA.34, CLA.55, CLA.58, CLA.62, CLA.63, CLA.64, CLA.65, CLA.85, CLA.86, BCR.102
Ligand excluded by PLIPBCR.99: 16 residues within 4Å:- Chain A: V.83, I.86
- Chain H: A.22, I.26, N.29
- Ligands: CLA.6, CLA.7, CLA.8, CLA.9, CLA.11, CLA.28, CLA.42, BCR.51, CLA.80, BCR.94, BCR.100
Ligand excluded by PLIPBCR.100: 16 residues within 4Å:- Chain A: W.119
- Chain H: Y.6, P.11, V.12, T.15, F.19, G.23, I.26, E.27, R.30
- Ligands: CLA.3, CLA.7, CLA.9, CLA.11, CLA.98, BCR.99
Ligand excluded by PLIPBCR.101: 22 residues within 4Å:- Chain B: F.428, H.432, L.436, I.455, F.520, H.524
- Chain F: K.80, L.96, E.107, F.108, P.111, L.114
- Chain H: N.32, L.35, L.36, V.37, Y.38, P.39
- Ligands: CLA.79, CLA.80, CLA.83, BCR.94
Ligand excluded by PLIPBCR.102: 15 residues within 4Å:- Chain B: L.690
- Chain G: I.15
- Chain I: F.63, S.82, G.85, L.86, I.89
- Ligands: CLA.32, CLA.33, CLA.34, CLA.56, CLA.65, CLA.85, BCR.97, CLA.104
Ligand excluded by PLIPBCR.106: 19 residues within 4Å:- Chain G: M.22, L.25, F.26, I.29
- Chain I: I.51, L.90, C.93, L.94, Y.97, W.114, W.127
- Ligands: CLA.33, CLA.56, CLA.59, CLA.64, CLA.85, CLA.86, PQN.87, CLA.104
Ligand excluded by PLIPBCR.107: 12 residues within 4Å:- Chain I: M.53, A.54, Y.57, I.129, G.133, S.134, F.137
- Ligands: CLA.32, CLA.34, CLA.103, CLA.104, CLA.105
Ligand excluded by PLIPBCR.108: 12 residues within 4Å:- Chain B: I.56, L.59
- Chain J: F.8, L.11, A.14, L.15, P.17, G.18, A.21, A.25
- Ligands: CLA.59, CLA.62
Ligand excluded by PLIP- 2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.52: 26 residues within 4Å:- Chain A: W.50, N.51, H.53, A.54, D.55, F.400, R.572, W.589, L.596, S.720, T.722, Q.723, A.726, V.729, A.730, L.733, L.734, I.737
- Ligands: CLA.3, CLA.4, CLA.6, CLA.8, CLA.11, CLA.28, CLA.30, CLA.42
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:F.400, A:Q.723, A:V.729, A:L.733, A:I.737
- Hydrogen bonds: A:N.51, A:S.720, A:T.722
- Salt bridges: A:R.572, A:R.572
LHG.53: 11 residues within 4Å:- Chain A: H.329, K.330, G.331, P.332, F.333, T.334, H.338
- Ligands: CLA.24, CLA.31, CLA.43, BCR.49
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:F.333, A:T.334
- 1 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.91: 23 residues within 4Å:- Chain B: W.22, Y.23, I.25, A.26, T.27, F.381, S.559, W.576, F.579, V.706, Q.707, L.710, A.714, A.717, V.718, I.721
- Ligands: CLA.59, CLA.61, CLA.64, CLA.75, CLA.77, CLA.86, PQN.87
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:W.22, B:Y.23, B:I.25, B:A.26, B:F.381, B:F.579, B:Q.707, B:V.718, B:I.721
- Hydrogen bonds: B:S.559
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kato, K. et al., Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes. Biorxiv (2022)
- Release Date
- 2022-02-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II, cyanelle: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit XI: I
Photosystem I reaction center subunit XII: J - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
IH
JI
LJ
M - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 80 x CLA: CHLOROPHYLL A(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)
- 19 x BCR: BETA-CAROTENE(Non-covalent)
- 2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 1 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kato, K. et al., Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes. Biorxiv (2022)
- Release Date
- 2022-02-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II, cyanelle: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit XI: I
Photosystem I reaction center subunit XII: J - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
IH
JI
LJ
M - Membrane
-
We predict this structure to be a membrane protein.