SMTL ID : 7dtk.1

Crystal structure of the RecA1 domain of RNA helicase CGH-1 in C. elegans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.42 GOL.2: 6 residues within 4Å: Chain A: D.37, F.38, G.65 Chain B: L.68, T.69, K.94 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.37, B:K.94 GOL.3: 5 residues within 4Å: Chain B: S.118, Q.119, V.122, V.132, V.134 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.118, B:S.118, B:Q.119, B:V.132 Water bridges: B:V.134 GOL.4: 7 residues within 4Å: Chain B: S.57, I.59, K.78, N.79, G.80, G.82, K.83 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.57, B:S.57, B:G.82, B:K.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans. Biochem.Biophys.Res.Commun. (2021)

Release Date

2021-03-17

Peptides

ATP-dependent RNA helicase cgh-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

ATP-dependent RNA helicase cgh-1