- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 40 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 9 residues within 4Å:- Chain A: G.1102, F.1103, D.1107, C.1144, N.1145, Q.1148, H.1205, G.1206, E.1207
Ligand excluded by PLIPGOL.3: 8 residues within 4Å:- Chain A: E.657, T.659, M.678, W.682, Q.683, E.1014, K.1018, R.1177
Ligand excluded by PLIPGOL.4: 4 residues within 4Å:- Chain A: A.920, V.961, H.962, Y.963
Ligand excluded by PLIPGOL.5: 6 residues within 4Å:- Chain A: H.911, C.912, A.969, G.970, R.987, D.1021
Ligand excluded by PLIPGOL.6: 4 residues within 4Å:- Chain A: Q.776, D.868, V.869, A.870
Ligand excluded by PLIPGOL.7: 6 residues within 4Å:- Chain A: A.718, R.722, D.764, K.767, A.768, E.772
Ligand excluded by PLIPGOL.8: 3 residues within 4Å:- Chain A: S.698, Y.699, Y.700
Ligand excluded by PLIPGOL.9: 4 residues within 4Å:- Chain A: E.1182, T.1184, Q.1185, R.1230
Ligand excluded by PLIPGOL.10: 9 residues within 4Å:- Chain A: K.336, R.488, E.492, D.495, A.1060, S.1061, H.1062, V.1063, E.1064
Ligand excluded by PLIPGOL.11: 8 residues within 4Å:- Chain A: H.305, R.326, Q.480, G.513, A.514, E.555, Q.557
- Ligands: SO4.51
Ligand excluded by PLIPGOL.12: 4 residues within 4Å:- Chain A: R.489, R.580, A.581, P.582
Ligand excluded by PLIPGOL.13: 6 residues within 4Å:- Chain A: I.642, D.923, D.924, H.925, L.926
- Ligands: SO4.48
Ligand excluded by PLIPGOL.14: 5 residues within 4Å:- Chain A: E.273, S.275, A.276, P.295, H.297
Ligand excluded by PLIPGOL.15: 2 residues within 4Å:- Chain A: Q.1192, R.1294
Ligand excluded by PLIPGOL.16: 7 residues within 4Å:- Chain A: H.225, H.228, N.268, K.301, G.784, K.785
- Ligands: SO4.51
Ligand excluded by PLIPGOL.17: 4 residues within 4Å:- Chain A: P.1187, S.1188, L.1189, Q.1192
Ligand excluded by PLIPGOL.18: 3 residues within 4Å:- Chain A: G.922, D.923, D.924
Ligand excluded by PLIPGOL.19: 7 residues within 4Å:- Chain A: A.634, L.635, R.637, L.847, G.848, G.860, D.861
Ligand excluded by PLIPGOL.20: 4 residues within 4Å:- Chain A: V.441, T.590, E.591, E.592
Ligand excluded by PLIPGOL.21: 2 residues within 4Å:- Chain A: R.945, Y.963
Ligand excluded by PLIPGOL.22: 2 residues within 4Å:- Chain A: H.844, K.862
Ligand excluded by PLIPGOL.23: 5 residues within 4Å:- Chain A: V.625, Q.626, L.628, P.756, G.757
Ligand excluded by PLIPGOL.24: 6 residues within 4Å:- Chain A: R.24, E.377, L.380, R.1005, D.1172, R.1173
Ligand excluded by PLIPGOL.25: 5 residues within 4Å:- Chain A: Q.38, V.39, H.40, S.126, T.127
Ligand excluded by PLIPGOL.26: 4 residues within 4Å:- Chain A: R.972, S.984, E.985, S.986
Ligand excluded by PLIPGOL.27: 4 residues within 4Å:- Chain A: P.313, V.369, D.373, E.377
Ligand excluded by PLIPGOL.28: 4 residues within 4Å:- Chain A: L.187, Y.216, L.457, E.550
Ligand excluded by PLIPGOL.29: 6 residues within 4Å:- Chain A: Q.356, P.357, W.358, K.647, R.648, H.651
Ligand excluded by PLIPGOL.30: 3 residues within 4Å:- Chain A: K.647, W.993
- Ligands: GOL.38
Ligand excluded by PLIPGOL.31: 7 residues within 4Å:- Chain A: L.1030, F.1032, D.1033, I.1034, N.1035, N.1285, W.1286
Ligand excluded by PLIPGOL.32: 3 residues within 4Å:- Chain A: R.821, H.822, R.886
Ligand excluded by PLIPGOL.33: 5 residues within 4Å:- Chain A: A.885, R.886, K.887, R.941, D.944
Ligand excluded by PLIPGOL.34: 4 residues within 4Å:- Chain A: E.1222, R.1230, V.1238, N.1251
Ligand excluded by PLIPGOL.35: 2 residues within 4Å:- Chain A: R.1003, P.1008
Ligand excluded by PLIPGOL.36: 5 residues within 4Å:- Chain A: S.94, W.96, E.116, R.117, V.119
Ligand excluded by PLIPGOL.37: 2 residues within 4Å:- Chain A: H.1134, P.1158
Ligand excluded by PLIPGOL.38: 4 residues within 4Å:- Chain A: K.647, E.985, W.993
- Ligands: GOL.30
Ligand excluded by PLIPGOL.39: 5 residues within 4Å:- Chain A: R.333, D.432, H.433, G.501, D.502
Ligand excluded by PLIPGOL.40: 8 residues within 4Å:- Chain A: T.286, G.287, R.578, I.1077, D.1078, D.1083, R.1088, I.1089
Ligand excluded by PLIPGOL.41: 4 residues within 4Å:- Chain A: P.357, D.639, R.648, R.857
Ligand excluded by PLIP- 19 x SO4: SULFATE ION(Non-functional Binders)
SO4.42: 5 residues within 4Å:- Chain A: H.1095, R.1135, P.1136, Q.1137, T.1138
Ligand excluded by PLIPSO4.43: 6 residues within 4Å:- Chain A: H.225, T.304, H.305, N.306, H.307, S.787
Ligand excluded by PLIPSO4.44: 3 residues within 4Å:- Chain A: G.1236, K.1237, V.1238
Ligand excluded by PLIPSO4.45: 5 residues within 4Å:- Chain A: Q.1185, Q.1192, G.1193, M.1194, V.1195
Ligand excluded by PLIPSO4.46: 6 residues within 4Å:- Chain A: S.21, A.22, F.23, N.1007, Q.1009, H.1170
Ligand excluded by PLIPSO4.47: 4 residues within 4Å:- Chain A: P.1049, K.1050, N.1093, H.1095
Ligand excluded by PLIPSO4.48: 3 residues within 4Å:- Chain A: T.641, I.642
- Ligands: GOL.13
Ligand excluded by PLIPSO4.49: 2 residues within 4Å:- Chain A: N.1122, R.1124
Ligand excluded by PLIPSO4.50: 3 residues within 4Å:- Chain A: W.314, R.1168, R.1173
Ligand excluded by PLIPSO4.51: 7 residues within 4Å:- Chain A: H.225, E.303, G.513, A.514, K.785
- Ligands: GOL.11, GOL.16
Ligand excluded by PLIPSO4.52: 3 residues within 4Å:- Chain A: K.842, H.844, R.867
Ligand excluded by PLIPSO4.53: 3 residues within 4Å:- Chain A: P.365, E.366, R.367
Ligand excluded by PLIPSO4.54: 2 residues within 4Å:- Chain A: N.1260, R.1262
Ligand excluded by PLIPSO4.55: 3 residues within 4Å:- Chain A: H.161, H.162, Q.163
Ligand excluded by PLIPSO4.56: 3 residues within 4Å:- Chain A: S.76, H.77, T.78
Ligand excluded by PLIPSO4.57: 3 residues within 4Å:- Chain A: A.190, S.223, E.224
Ligand excluded by PLIPSO4.58: 6 residues within 4Å:- Chain A: R.227, K.229, N.232, K.617, T.618, K.620
Ligand excluded by PLIPSO4.59: 5 residues within 4Å:- Chain A: S.59, Q.63, L.1120, F.1121, H.1123
Ligand excluded by PLIPSO4.60: 4 residues within 4Å:- Chain A: R.6, G.7, I.160, H.161
Ligand excluded by PLIP- 3 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
MG.61: 4 residues within 4Å:- Chain A: D.688, N.731, D.893
- Ligands: ADP.1
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.688, A:D.893, H2O.9, H2O.24
MG.62: 2 residues within 4Å:- Chain A: E.727
- Ligands: ADP.1
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:E.727, H2O.3, H2O.6, H2O.14, H2O.18
MG.63: 1 residues within 4Å:- Ligands: ADP.1
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sharma, N. et al., Mechanism of Coordinated Gating and Signal Transduction in Purine Biosynthetic Enzyme Formylglycinamidine Synthetase. Acs Catalysis (2022)
- Release Date
- 2022-01-19
- Peptides
- Phosphoribosylformylglycinamidine synthase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 40 x GOL: GLYCEROL(Non-functional Binders)
- 19 x SO4: SULFATE ION(Non-functional Binders)
- 3 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sharma, N. et al., Mechanism of Coordinated Gating and Signal Transduction in Purine Biosynthetic Enzyme Formylglycinamidine Synthetase. Acs Catalysis (2022)
- Release Date
- 2022-01-19
- Peptides
- Phosphoribosylformylglycinamidine synthase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A