SMTL ID : 7e1p.1

Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase C120S variant in complex with O6-methyldeoxyguanosine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x J03: (2~{R},3~{S},5~{R})-5-(2-azanyl-6-methoxy-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol(Non-covalent)

J03.1: 12 residues within 4Å: Chain A: Y.91, G.106, L.109, S.110, L.115, S.120, V.123, G.130, G.131, Y.132, S.133, K.139 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.91, A:S.120, A:G.131, A:S.133, A:K.139 Water bridges: A:G.130

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: M.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kikuchi, M. et al., Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase. Acta Crystallogr.,Sect.F (2021)

Release Date

2021-12-15

Peptides

Methylated-DNA--protein-cysteine methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methylated-DNA--protein-cysteine methyltransferase

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