SMTL ID : 7e25.1

Crystal structure of human FABP7 complexed with palmitic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: T.68, I.70, E.80, H.101, F.112, R.114 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.68, A:H.101, A:R.114, A:R.114

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.2: 13 residues within 4Å: Chain A: M.28, L.31, T.37, T.44, P.46, V.48, T.61, S.63, F.65, K.66, D.84, R.134, Y.136 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.31, A:T.37, A:T.44, A:P.46, A:T.61, A:F.65, A:D.84 Hydrogen bonds: A:Y.136 Water bridges: A:R.114 Salt bridges: A:R.134

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: F.35, R.38 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.35 Salt bridges: A:R.38 SO4.4: 3 residues within 4Å: Chain A: S.21, Q.22, N.23 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.23 SO4.5: 6 residues within 4Å: Chain A: P.2, R.3, G.4, S.5, H.6, M.7 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.4, A:S.5, A:H.6, A:M.7 Salt bridges: A:H.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nam, K.H., Crystal structure of human brain-type fatty acid-binding protein FABP7 complexed with palmitic acid. Acta Crystallogr D Struct Biol (2021)

Release Date

2021-07-14

Peptides

Fatty acid-binding protein, brain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, brain