SMTL ID : 7e27.1

Structure of PfFNT in complex with MMV007839

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-pentamer

Ligands

5 x HV6: (Z)-4,4,5,5,5-pentakis(fluoranyl)-1-(4-methoxy-2-oxidanyl-phenyl)-3-oxidanyl-pent-2-en-1-one(Non-covalent)

HV6.1: 14 residues within 4Å: Chain A: Y.31, V.54, F.90, A.93, F.94, I.97, I.98, L.104, T.106, G.107, V.196, V.220, F.223, H.230 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.94, A:F.94, A:F.94, A:I.97, A:I.98, A:L.104 Hydrogen bonds: A:Y.31, A:L.104, A:L.104, A:T.106, A:G.107, A:H.230 HV6.2: 14 residues within 4Å: Chain B: Y.31, V.54, F.90, A.93, F.94, I.97, I.98, L.104, T.106, G.107, V.196, V.220, F.223, H.230 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:F.94, B:F.94, B:F.94, B:I.97, B:I.98, B:L.104 Hydrogen bonds: B:Y.31, B:L.104, B:L.104, B:T.106, B:G.107, B:H.230 HV6.3: 14 residues within 4Å: Chain C: Y.31, V.54, F.90, A.93, F.94, I.97, I.98, L.104, T.106, G.107, V.196, V.220, F.223, H.230 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:F.94, C:F.94, C:F.94, C:I.97, C:I.98, C:L.104 Hydrogen bonds: C:Y.31, C:L.104, C:L.104, C:T.106, C:G.107, C:H.230 HV6.4: 14 residues within 4Å: Chain D: Y.31, V.54, F.90, A.93, F.94, I.97, I.98, L.104, T.106, G.107, V.196, V.220, F.223, H.230 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:F.94, D:F.94, D:F.94, D:I.97, D:I.98, D:L.104 Hydrogen bonds: D:Y.31, D:L.104, D:L.104, D:T.106, D:G.107, D:H.230 HV6.5: 14 residues within 4Å: Chain E: Y.31, V.54, F.90, A.93, F.94, I.97, I.98, L.104, T.106, G.107, V.196, V.220, F.223, H.230 12 PLIP interactions: 12 interactions with chain E Hydrophobic interactions: E:F.94, E:F.94, E:F.94, E:I.97, E:I.98, E:L.104 Hydrogen bonds: E:Y.31, E:L.104, E:L.104, E:T.106, E:G.107, E:H.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, X. et al., Structural characterization of the Plasmodium falciparum lactate transporter PfFNT alone and in complex with antimalarial compound MMV007839 reveals its inhibition mechanism. Plos Biol. (2021)

Release Date

2021-08-18

Peptides

Formate-nitrite transporter: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
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Formate-nitrite transporter

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