SMTL ID : 7e34.1

Crystal structure of SUN1-Speedy A-CDK2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: L.296, R.297, L.298 No protein-ligand interaction detected (PLIP) GOL.3: 3 residues within 4Å: Chain D: L.296, R.297, L.298 No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain B: C.32, K.34 Chain E: C.31, C.32 Ligands: ZN.4 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain B Metal complexes: E:C.32, B:C.32 ZN.4: 5 residues within 4Å: Chain B: C.31, C.32 Chain E: C.32, K.34 Ligands: ZN.2 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain B Metal complexes: E:C.32, B:C.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Y. et al., The SUN1-SPDYA interaction plays an essential role in meiosis prophase I. Nat Commun (2021)

Release Date

2021-04-14

Peptides

Cyclin-dependent kinase 2: AD
Speedy protein A: BE
SUN domain-containing protein 1: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

B
B

E
B

C
C

F
C

Cyclin-dependent kinase 2

Speedy protein A

SUN domain-containing protein 1