SMTL ID : 7e5j.1

Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 8 residues within 4Å: Chain A: Q.20, W.121, E.165, Y.296, E.353, W.400, E.407, W.408 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.20, A:E.165, A:W.400 Water bridges: A:E.165, A:N.222

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: S.18, Y.19, E.22, G.23, G.51, A.54 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.22, A:G.23, A:G.23 NA.3: 5 residues within 4Å: Chain A: S.39, R.40, S.48, H.49, N.50 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.48, A:N.50 NA.4: 5 residues within 4Å: Chain A: F.255, Q.286, K.287, L.288, M.347 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.288 Water bridges: A:L.254, A:K.287

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, I.J. et al., Biochemical and Structural Analysis of a Glucose-Tolerant beta-Glucosidase from the Hemicellulose-Degrading Thermoanaerobacterium saccharolyticum. Molecules (2022)

Release Date

2022-02-23

Peptides

Beta-glucosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-glucosidase