SMTL ID : 7e7c.1

Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at K27

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x ALA- ALA- ARG- ALY: Histone H3K27ac(24-27) peptide(Non-covalent)

ALA-ALA-ARG-ALY.1: 14 residues within 4Å: Chain A: F.31, H.59, S.61, F.62, G.80, Y.81, A.82, G.83, F.84, I.85, D.106, L.107, F.108, N.110 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.31, A:F.62, A:Y.81, A:A.82, A:F.84 Hydrogen bonds: A:S.61, A:S.61, A:Y.81, A:A.82, A:G.83, A:G.83, A:F.84, A:L.107 Water bridges: A:I.85 Salt bridges: A:D.106

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: K.53, R.66, V.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.53 EDO.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.4: 2 residues within 4Å: Chain A: C.45, D.46 Ligand excluded by PLIP IOD.5: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at K27. To Be Published

Release Date

2022-04-06

Peptides

Protein ENL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein ENL

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