SMTL ID : 7ehz.1

Structure of human NNMT in complex with macrocyclic peptide 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GLY- MEA- PRO- TYR- ARG- PRO- DI8- XA6- CYS: macrocyclic peptide 2(Non-covalent)

GLY-MEA-PRO-TYR-ARG-PRO-DI8-XA6-CYS.1: 21 residues within 4Å: Chain A: S.12, Y.19, Y.23, Y.24, E.33, I.36, L.37, G.62, S.63, G.64, T.66, Y.68, Q.69, Y.85, N.89, T.162, L.163, C.164, A.167, A.168, K.199 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Y.23, A:Y.23, A:Y.24, A:E.33, A:I.36, A:L.37, A:Y.85, A:L.163, A:L.163, A:A.167 Hydrogen bonds: A:Q.69, A:N.89, A:T.162, A:D.166, A:D.166 Water bridges: A:Y.19, A:S.86 pi-Stacking: A:Y.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayashi, K. et al., Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell. Acs Med.Chem.Lett. (2021)

Release Date

2021-12-15

Peptides

Nicotinamide N-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nicotinamide N-methyltransferase

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