SMTL ID : 7ekl.1

Mitochondrial outer membrane protein

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 22 residues within 4Å: Chain A: L.362, Y.599, R.603, T.605, S.625, G.626, A.627, G.628, K.629, S.630, T.631, Q.671, H.783 Chain B: F.712, K.726, L.727, S.728, G.729, G.730, E.731, A.756 Ligands: MG.2 18 PLIP interactions: 14 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:R.603, A:G.626, A:G.626, A:A.627, A:G.628, A:K.629, A:S.630, A:T.631, A:Q.671, B:G.729, B:G.730, B:E.731, B:A.756 Salt bridges: A:K.629, A:K.629, A:H.783 pi-Stacking: A:Y.599, A:Y.599 ATP.3: 22 residues within 4Å: Chain A: F.712, K.726, L.727, S.728, G.729, G.730, E.731, A.756 Chain B: L.362, Y.599, R.603, T.605, S.625, G.626, A.627, G.628, K.629, S.630, T.631, Q.671, H.783 Ligands: MG.4 18 PLIP interactions: 4 interactions with chain A, 14 interactions with chain B Hydrogen bonds: A:G.729, A:G.730, A:E.731, A:A.756, B:R.603, B:G.626, B:G.626, B:A.627, B:G.628, B:K.629, B:S.630, B:T.631, B:Q.671 Salt bridges: B:K.629, B:K.629, B:H.783 pi-Stacking: B:Y.599, B:Y.599

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.630, Q.671 Ligands: ATP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.630 MG.4: 3 residues within 4Å: Chain B: S.630, Q.671 Ligands: ATP.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:S.630

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, G. et al., Molecular insights into the human ABCB6 transporter. Cell Discov (2021)

Release Date

2021-08-25

Peptides

ATP-binding cassette sub-family B member 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family B member 6