SMTL ID : 7ekx.1 (1 other biounit)

Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (W470A E564Q) in complex with maltononaose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 7 residues within 4Å: Chain A: I.1335, N.1336, Y.1351, Y.1354, S.1399, D.1400, Y.1401 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.1336, A:N.1336, A:Y.1401

1 x GLC- GLC- GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose

GLC-GLC-GLC-GLC-GLC.2: 16 residues within 4Å: Chain A: H.1066, Y.1071, M.1072, W.1075, L.1115, R.1123, N.1205, L.1206, D.1207, R.1208, D.1241, K.1242, Y.1407, N.1409, Y.1424, D.1503 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.1208

1 x GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose

GLC-GLC-GLC.3: 2 residues within 4Å: Chain A: P.1204, D.1212 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shen, M. et al., Crystal structures of glycogen-debranching enzyme mutants in complex with oligosaccharides. Acta Crystallogr.,Sect.F (2021)

Release Date

2021-11-10

Peptides

4-alpha-glucanotransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

4-alpha-glucanotransferase

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