SMTL ID : 7emg.1

Carbonyl Reductase Variant 4 (R123C/L209P/F183Y/V61K) from Serratia marcescens complexed with NADP+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 27 residues within 4Å: Chain A: G.20, A.21, S.22, R.23, G.24, I.25, A.44, T.45, S.46, L.66, N.67, V.68, K.69, N.94, A.95, G.96, I.97, T.117, I.144, G.145, S.146, Y.159, P.189, G.190, I.192, T.194 Ligands: EDO.2 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:P.189 Hydrogen bonds: A:G.20, A:S.22, A:S.22, A:S.22, A:I.25, A:T.45, A:T.45, A:S.46, A:N.67, A:V.68, A:N.94, A:N.94, A:G.96, A:I.192 Water bridges: A:G.20 Salt bridges: A:R.23, A:R.23 NDP.3: 15 residues within 4Å: Chain B: G.20, A.21, S.22, R.23, A.44, T.45, L.66, N.67, V.68, K.69, A.95, G.96, I.97, T.117, M.196 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.20, B:S.22, B:T.45, B:N.67, B:V.68, B:G.96, B:G.96 Water bridges: B:R.23 Salt bridges: B:R.23, B:R.23

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: V.148, Q.156, G.190, M.249 Ligands: NDP.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.156, A:G.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, T. et al., Stereoselective synthesis of chiral delta-lactones via an engineered carbonyl reductase. Chem.Commun.(Camb.) (2021)

Release Date

2021-10-06

Peptides

3-oxoacyl-[acyl-carrier-protein] reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-oxoacyl-[acyl-carrier-protein] reductase