SMTL ID : 7eod.2 (1 other biounit)

MITF HLHLZ Delta AKE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: N.5, I.6, N.7 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.5, A:I.6, A:N.7 Water bridges: A:N.7, A:N.7 GOL.2: 5 residues within 4Å: Chain A: R.67, E.70, L.71 Chain B: I.68, G.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.67, A:R.67 GOL.3: 6 residues within 4Å: Chain A: I.17, P.18, A.35, D.38, Y.39, K.42 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.18 Water bridges: A:D.38, A:K.42 GOL.4: 5 residues within 4Å: Chain A: E.46, R.49, L.50 Chain B: Q.47, E.51 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.46, A:E.46, A:R.49, B:Q.47 GOL.5: 3 residues within 4Å: Chain A: H.63, L.64, R.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.67 Water bridges: A:H.63 GOL.6: 0 residues within 4Å: (No contacts) 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.69, A:G.72 GOL.7: 4 residues within 4Å: Chain B: R.62, L.65, L.66, Q.69 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.62, B:Q.69, B:Q.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z. et al., A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy. Cell Res. (2023)

Release Date

2022-04-27

Peptides

Isoform M1 of Microphthalmia-associated transcription factor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Isoform M1 of Microphthalmia-associated transcription factor

Related Entries With Identical Sequence