SMTL ID : 7ey4.1

Local CryoEM of the SARS-CoV-2 S6PV2 in complex with BD-667

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 3.69 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 4 residues within 4Å: Chain D: Q.115, E.132, N.164, N.165 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, S. et al., Structures of SARS-CoV-2 B.1.351 neutralizing antibodies provide insights into cocktail design against concerning variants. Cell Res. (2021)

Release Date

2021-09-08

Peptides

BD-667 L: A
BD-667 H: B
Spike glycoprotein: C
Spike glycoprotein: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
R

D
N

BD-667 L

BD-667 H

Spike glycoprotein

Spike glycoprotein

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