SMTL ID : 7eyi.1

Crystal structure of ZBTB7A in complex with gamma-globin -200 sequence element with C-194A mutation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.7, C.10, H.23, H.27 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.7, A:C.10, A:H.23, A:H.27 ZN.2: 4 residues within 4Å: Chain A: C.35, C.38, H.51, H.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.35, A:C.38, A:H.51, A:H.55 ZN.3: 4 residues within 4Å: Chain A: C.63, C.66, H.79, H.83 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.63, A:C.66, A:H.79, A:H.83 ZN.4: 4 residues within 4Å: Chain A: C.91, C.94, H.107, C.113 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.91, A:C.94, A:H.107, A:C.113 ZN.5: 4 residues within 4Å: Chain B: C.35, C.38, H.51, H.55 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.35, B:C.38, B:H.51, B:H.55 ZN.6: 4 residues within 4Å: Chain B: C.63, C.66, H.79, H.83 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.63, B:C.66, B:H.79, B:H.83 ZN.7: 4 residues within 4Å: Chain B: C.7, C.10, H.23, H.27 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.7, B:C.10, B:H.23, B:H.27 ZN.8: 5 residues within 4Å: Chain B: C.91, S.93, C.94, H.107, C.113 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.91, B:H.107, B:C.113

1 x BO3: BORIC ACID(Non-covalent)

BO3.9: 7 residues within 4Å: Chain A: D.75, R.100 Chain C: T.12, C.13 Chain D: G.6, G.7, A.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Y. et al., Structural basis for human ZBTB7A action at the fetal globin promoter. Cell Rep (2021)

Release Date

2021-09-01

Peptides

Zinc finger and BTB domain-containing protein 7A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Zinc finger and BTB domain-containing protein 7A