SMTL ID : 7f09.2 (1 other biounit)

Crystal structure of the HLH-Lz domain of human TFE3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: R.7, E.10 Chain B: R.39 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.10, H2O.1 ZN.2: 2 residues within 4Å: Chain A: G.1, D.6 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:G.1, A:D.6 ZN.3: 1 residues within 4Å: Chain B: G.1 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:G.1, H2O.1

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain B: L.67, Q.70 No protein-ligand interaction detected (PLIP) EDO.5: 1 residues within 4Å: Chain B: D.36 1 PLIP interactions: 1 interactions with chain B Water bridges: B:D.36 EDO.6: 1 residues within 4Å: Chain B: E.59 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, G. et al., Structural basis for the dimerization mechanism of human transcription factor E3. Biochem.Biophys.Res.Commun. (2021)

Release Date

2021-07-21

Peptides

Transcription factor E3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Transcription factor E3

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