SMTL ID : 7f2d.1

Arabidopsis thaliana protease-associated domain of vacuolar-sorting receptor 1 in complex with cruciferin 1 C-terminal pentapeptide RVAAA (pH9)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x ARG- VAL- ALA- ALA- ALA: Cruciferin 1 C-terminal peptide(Non-covalent)

ARG-VAL-ALA-ALA-ALA.1: 9 residues within 4Å: Chain A: R.78, C.81, Y.82, F.83, I.109, T.110, M.111, D.112, T.113 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.109, A:I.109, A:D.112 Hydrogen bonds: A:F.83, A:T.110, A:T.110, A:T.110, A:D.112 Salt bridges: A:R.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsao, H.E. et al., Structural insights into how vacuolar sorting receptors recognize the sorting determinants of seed storage proteins. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-01-12

Peptides

Vacuolar-sorting receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vacuolar-sorting receptor 1

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