SMTL ID : 7f2e.4 (5 other biounits)

SARS-CoV-2 nucleocapsid protein C-terminal domain (dodecamer)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: T.28, E.69, W.76 Chain B: A.82 Ligands: PO4.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.69, A:E.69, A:S.73 PO4.2: 6 residues within 4Å: Chain A: Q.27, E.69, T.78 Chain B: G.81, A.82 Ligands: PO4.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, Z. et al., Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies. Febs J. (2022)

Release Date

2021-10-20

Peptides

Nucleoprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Nucleoprotein

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