SMTL ID : 7f2r.2 (1 other biounit)

Crystal structure of VinK-VinL covalent complex formed with a pantetheineamide cross-linking probe

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 9EF: N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide(Covalent)

9EF.1: 16 residues within 4Å: Chain A: M.29, P.31, Y.73, C.107, S.151, C.178, M.186, Y.210, M.212, M.216, H.217, L.272, L.297 Chain B: R.33, D.38, S.39 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.39 Water bridges: B:L.40, B:L.40, A:L.297 Salt bridges: B:R.33 Hydrophobic interactions: A:L.272, A:L.297

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyanaga, A. et al., Complex structure of the acyltransferase VinK and the carrier protein VinL with a pantetheine cross-linking probe. Acta Crystallogr.,Sect.F (2021)

Release Date

2021-09-01

Peptides

Malonyl-CoA-[acyl-carrier-protein] transacylase: A
Acyl-carrier-protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Malonyl-CoA-[acyl-carrier-protein] transacylase

Acyl-carrier-protein

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