SMTL ID : 7f30.1

Crystal structure of OxdB E85A in complex with Z-2- (3-bromophenyl) propanal oxime

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: L.128, H.150, E.151, Y.152, W.153, G.154, A.155, M.156, I.200, T.202, Q.204, V.221, L.225, V.262, Y.266, L.272, W.275, T.276, H.277, H.282, I.285, Y.286, F.289, L.304 Ligands: 0WQ.2 30 PLIP interactions: 30 interactions with chain A, Hydrophobic interactions: A:M.156, A:I.200, A:T.202, A:Q.204, A:V.221, A:V.262, A:V.262, A:L.272, A:W.275, A:W.275, A:T.276, A:I.285, A:I.285, A:Y.286, A:F.289, A:F.289, A:F.289, A:L.304, A:L.304 Hydrogen bonds: A:E.151, A:G.154, A:A.155, A:M.156 Water bridges: A:R.157, A:R.159, A:R.159 Salt bridges: A:H.150, A:H.277 pi-Cation interactions: A:H.306 Metal complexes: A:H.282

1 x 0WQ: Z-2-(3-bromophenyl) propanal oxime(Non-covalent)

0WQ.2: 9 residues within 4Å: Chain A: A.14, L.128, S.130, T.202, F.289, L.304, W.305, H.306 Ligands: HEM.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.128, A:F.289, A:L.304 Hydrogen bonds: A:T.202

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsui, D. et al., Crystal structural analysis of aldoxime dehydratase from Bacillus sp. OxB-1: Importance of surface residues in optimization for crystallization. J.Inorg.Biochem. (2022)

Release Date

2022-04-27

Peptides

Phenylacetaldoxime dehydratase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phenylacetaldoxime dehydratase

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